Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 RPPH1-2P-201ENST00000516688 293 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 OR8K4P-201ENST00000534608 872 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC234778.2-201ENST00000566241 354 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 HSPE1P7-201ENST00000604681 321 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC021851.1-201ENST00000608537 1082 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AL161734.1-201ENST00000609720 557 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC025016.1-201ENST00000616746 682 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AP006248.3-201ENST00000623580 594 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AP003400.6-201ENST00000624698 740 ntBASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV3A0A0B4J244 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 RNU6-252P-201ENST00000363232 107 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 RNU6-444P-201ENST00000383988 108 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 UBE2V1P2-201ENST00000397758 440 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 RPS4XP7-201ENST00000406274 780 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 RPL7P30-201ENST00000420888 709 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 SUMO1P4-201ENST00000429430 302 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC018634.1-201ENST00000437554 401 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 XKRY2-201ENST00000442362 1093 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AL031183.1-201ENST00000457667 207 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 RPL31P50-201ENST00000471002 296 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 RPS4XP6-201ENST00000477670 797 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC023424.2-201ENST00000493479 777 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 MTND3P24-201ENST00000506306 329 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC234781.5-201ENST00000508429 271 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 PRELID3BP4-201ENST00000515476 571 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 SNORA31.11-201ENST00000516528 139 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 HIGD1AP6-201ENST00000521833 279 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC087276.1-201ENST00000529659 480 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AP002770.2-201ENST00000543613 532 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC025281.1-201ENST00000567026 265 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC105137.2-201ENST00000569073 466 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 MIR3162-201ENST00000581818 82 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 RPL23AP78-201ENST00000599928 470 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 U73023.1-201ENST00000603134 700 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AP001330.4-201ENST00000604350 154 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC026790.2-201ENST00000606282 430 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC016542.1-201ENST00000608259 493 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 AC011890.2-201ENST00000613393 294 ntBASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
TRAV3A0A0B4J244 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
TRAV3A0A0B4J244 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
TRAV3A0A0B4J244 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.84□□□□□ -2.12
TRAV3A0A0B4J244 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
TRAV3A0A0B4J244 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
TRAV3A0A0B4J244 AC093536.2-201ENST00000565257 1406 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 RNU5D-1-201ENST00000363299 116 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 RNU6-1339P-201ENST00000363574 91 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 SNORA27.3-201ENST00000364937 134 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 RNU6-40P-201ENST00000384254 107 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 TAF9BP2-201ENST00000400856 499 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 AL136372.1-201ENST00000403060 228 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 SNORA11.2-201ENST00000408318 127 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 RPS15AP7-201ENST00000439294 405 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 AC126389.1-201ENST00000477436 290 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 CDC42P4-201ENST00000510507 563 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.83□□□□□ -2.12
TRAV3A0A0B4J244 AC004217.3-201ENST00000551552 878 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms