Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 AC139103.1-201ENST00000534696 1030 ntBASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 AC234778.2-201ENST00000566241 354 ntBASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 AC025281.1-201ENST00000567026 265 ntBASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 AC010546.1-201ENST00000569391 485 ntBASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 AC067747.1-201ENST00000608026 250 ntBASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 MIR1291-201ENST00000627649 87 ntBASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 CU459211.1-201ENST00000635667 749 ntBASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 AC123912.3-201ENST00000600907 1367 ntBASIC1.79□□□□□ -2.12
HLA-DRB4X5D2U9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 CKAP2P1-201ENST00000555477 2049 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AL136360.1-201ENST00000503377 1900 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 ZNF720P1-201ENST00000562403 1939 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 FTLP6-201ENST00000355274 422 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 RNU6-461P-201ENST00000364195 107 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AL031679.1-201ENST00000400616 525 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 WARS2P1-201ENST00000429678 537 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AL445687.1-201ENST00000439946 251 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AL121871.1-201ENST00000443413 436 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 FAM172BP-201ENST00000487497 1089 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 MLLT10P2-201ENST00000506434 249 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC234781.5-201ENST00000508429 271 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC112673.1-201ENST00000513168 575 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 RPL7P20-201ENST00000520308 745 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC092470.1-201ENST00000546187 132 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AMZ2P1-203ENST00000565833 850 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC061975.8-201ENST00000587058 721 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AL390838.2-201ENST00000602394 274 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC006023.1-201ENST00000603944 259 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC026790.2-201ENST00000606282 430 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC103810.6-201ENST00000606708 136 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC106028.5-201ENST00000610332 395 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AC079597.1-201ENST00000624306 508 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 CTSLP2-204ENST00000629029 392 ntBASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.78□□□□□ -2.12
HLA-DRB4X5D2U9 AL049780.3-201ENST00000624612 1583 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 MTND4P1-201ENST00000457501 1466 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 RNU6-386P-201ENST00000362650 107 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 RNU6-989P-201ENST00000362756 107 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 SSXP10-201ENST00000402595 565 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 RNU4-72P-201ENST00000410754 173 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 Z99127.2-201ENST00000441426 334 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 IFNA11P-201ENST00000446352 526 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 RPL31P50-201ENST00000471002 296 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AL135752.1-201ENST00000479477 471 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 LINC00888-204ENST00000487386 421 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 RNU1-103P-201ENST00000516502 125 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC021269.2-201ENST00000532318 330 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC078814.3-201ENST00000553036 491 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC105137.2-201ENST00000569073 466 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC022069.1-201ENST00000582910 658 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AL121917.1-203ENST00000605534 577 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC110792.4-201ENST00000609843 298 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 MIR6840-201ENST00000611937 71 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 AC245884.12-201ENST00000615364 59 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DRB4X5D2U9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DRB4X5D2U9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms