Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC008885.2-201ENST00000509506 930 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 RNU6-711P-201ENST00000517255 106 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC022690.1-201ENST00000526681 550 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC004923.2-201ENST00000529649 369 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 CU459211.1-201ENST00000635667 749 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC009487.4-201ENST00000624969 3585 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 RNA5SP99-201ENST00000364020 114 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 DEFA7P-201ENST00000382676 285 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 SNORA67.3-201ENST00000384366 140 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 RPS15AP40-201ENST00000419621 391 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 HSPE1P1-201ENST00000421494 318 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 MTATP6P4-201ENST00000427725 675 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC104332.2-201ENST00000429959 156 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 YWHAZP7-201ENST00000436906 631 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AL118520.1-201ENST00000450770 291 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 RPL23AP42-201ENST00000471152 471 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 HMGN2P13-201ENST00000476476 274 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC107398.1-201ENST00000486904 505 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 ATG10-AS1-201ENST00000504846 648 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC138473.1-201ENST00000605717 526 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AL390240.1-201ENST00000612950 384 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 MIR6076-201ENST00000617521 113 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC084035.1-201ENST00000634543 607 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AC119674.1-220ENST00000641502 1048 ntBASIC2.36□□□□□ -2.03
SCN10AQ9Y5Y9 AL136520.1-201ENST00000600311 1322 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AC091564.4-201ENST00000533934 2194 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 DYNLT3P1-201ENST00000378574 347 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AL591034.1-201ENST00000407447 340 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 Y_RNA.595-201ENST00000410403 105 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 SAR1AP4-201ENST00000429225 591 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 YWHAZP8-201ENST00000436935 731 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AC004866.2-201ENST00000438285 481 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AC009961.3-201ENST00000449832 765 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AL445669.2-201ENST00000454425 421 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AC078814.3-201ENST00000553036 491 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 MIR4506-201ENST00000584693 77 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 VN1R9P-201ENST00000614184 867 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AL391597.1-201ENST00000618707 694 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 AL512643.1-201ENST00000635735 524 ntBASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCN10AQ9Y5Y9 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 AL161781.1-201ENST00000354277 403 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 MTATP6P31-201ENST00000406985 692 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 RNU6-1077P-201ENST00000410506 102 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 VTA1P1-201ENST00000414044 866 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 RFESDP1-201ENST00000422350 461 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 RPL7P5-201ENST00000471472 736 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 FAM92A1P2-202ENST00000504766 877 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 AC004062.1-201ENST00000509926 645 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 RNU6-1073P-201ENST00000517182 106 ntBASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SCN10AQ9Y5Y9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 OR4G2P-202ENST00000641004 1759 ntBASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 Y_RNA.226-201ENST00000364337 114 ntBASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 RNU6-452P-201ENST00000384406 107 ntBASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 MORF4L1P6-201ENST00000418771 268 ntBASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 CKS1BP2-201ENST00000497342 240 ntBASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 RPL23AP55-201ENST00000498163 452 ntBASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 HMGB1P22-201ENST00000505315 124 ntBASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 AC022616.2-201ENST00000523185 300 ntBASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 AC011494.1-201ENST00000596454 237 ntBASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
SCN10AQ9Y5Y9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 AC090740.1-201ENST00000623193 2262 ntBASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 AL121882.1-201ENST00000422893 417 ntBASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 AL445646.1-201ENST00000431784 216 ntBASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 HIGD1AP11-201ENST00000438361 280 ntBASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 AC072039.1-201ENST00000477611 581 ntBASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms