Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHB1Q9Y5F3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-1322P-201ENST00000364309 107 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 U3.11-201ENST00000364476 212 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RNU1-13P-201ENST00000384499 162 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RNA5SP317-201ENST00000410176 116 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RN7SKP167-201ENST00000411047 285 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RNA5SP311-201ENST00000411290 116 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RPS20P14-201ENST00000412545 360 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC007283.2-201ENST00000424739 197 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 HMGB3P12-201ENST00000438745 556 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AL162388.1-201ENST00000450912 352 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RPL5P30-201ENST00000465511 891 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC034236.1-201ENST00000469891 373 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RN7SL604P-201ENST00000492589 296 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC093278.1-201ENST00000494700 600 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RNA5SP315-201ENST00000516340 116 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RNU2-10P-201ENST00000516375 211 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RNA5SP312-201ENST00000517068 116 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC090572.1-201ENST00000519251 160 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC022882.1-201ENST00000532142 501 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AL121579.1-201ENST00000555129 305 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AL133153.1-201ENST00000557756 303 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 MIR4429-201ENST00000580105 73 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC079587.1-201ENST00000603846 277 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AL160290.3-201ENST00000604869 165 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 AC138915.3-201ENST00000562908 1389 ntBASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHB1Q9Y5F3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AL592182.3-201ENST00000642132 3304 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 Y_RNA.159-201ENST00000363674 87 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 RNU1-39P-201ENST00000383897 165 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 RPS3AP24-201ENST00000407896 734 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 USP9YP6-201ENST00000413550 854 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 HMGB3P20-201ENST00000417997 600 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 MTCO1P20-201ENST00000425366 358 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 OR4K11P-201ENST00000431829 904 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 SNRPEP8-201ENST00000442866 260 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 NANOGP10-201ENST00000453325 895 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AC020893.1-201ENST00000502452 580 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 STMN1P2-201ENST00000508435 439 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-410P-201ENST00000517006 107 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AK6P1-201ENST00000540219 478 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 RPL21P12-201ENST00000559810 515 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AC098848.2-201ENST00000588023 330 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AL353621.2-201ENST00000605340 133 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AC092794.2-201ENST00000620933 563 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms