Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MIR23B-201ENST00000384832 97 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 CCDC58P2-201ENST00000417131 366 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AL389915.1-201ENST00000422463 466 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AC009237.8-201ENST00000445492 379 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 RN7SL807P-201ENST00000470923 297 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 RN7SL633P-201ENST00000488974 297 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AL358832.1-201ENST00000497800 389 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AC010460.2-201ENST00000509054 677 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 OR5BM1P-201ENST00000512021 366 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 RNU6-1282P-201ENST00000516735 96 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AC083760.1-201ENST00000589621 670 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AC012119.1-201ENST00000603184 222 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AC080013.4-201ENST00000607624 649 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AC084035.1-201ENST00000634543 607 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 CRYM-AS1-204ENST00000637983 556 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AL163152.1-201ENST00000642001 374 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 SDAD1P2-201ENST00000441308 2028 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 AC022336.2-201ENST00000568966 2538 ntBASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 MIR22-201ENST00000362190 85 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 RNU6-354P-201ENST00000383862 107 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 RNU6-657P-201ENST00000383904 107 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 RNU6-610P-201ENST00000384264 107 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 SNORA54-201ENST00000384281 123 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AL451074.5-201ENST00000415894 435 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 NDUFB4P7-201ENST00000423198 363 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 TAAR7P-201ENST00000436141 242 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 MTCYBP11-201ENST00000447254 1109 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 OR6K1P-201ENST00000456766 971 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC087588.1-201ENST00000462203 316 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC092757.1-201ENST00000467293 467 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 RPL7P49-201ENST00000471402 708 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 DYNLL1P6-201ENST00000503440 264 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC109464.2-201ENST00000510242 943 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 RN7SKP40-201ENST00000517211 242 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC023632.1-201ENST00000518463 375 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 ZNF971P-201ENST00000562068 1249 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 MIR5004-201ENST00000579078 107 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AL022067.1-201ENST00000602426 454 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 DUXAP11-201ENST00000603858 526 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC069234.5-201ENST00000611056 416 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 DUXAP10-204ENST00000612052 616 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC091948.2-201ENST00000636510 279 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 U6.101-201ENST00000637707 76 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 OR5BR1P-201ENST00000524992 1330 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC092447.7-201ENST00000422212 1621 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC097714.1-201ENST00000511272 1647 ntBASIC2.6□□□□□ -1.99
RHBDD3Q9Y3P4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 SNORA63.1-201ENST00000362493 131 ntBASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 RNU6-468P-201ENST00000384003 109 ntBASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 RNU6-1035P-201ENST00000384477 107 ntBASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 RNU6-1300P-201ENST00000391046 108 ntBASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 MTND2P5-201ENST00000432656 1006 ntBASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 COX6CP2-201ENST00000444980 225 ntBASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 snoU13.28-201ENST00000459235 104 ntBASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 RNU7-23P-201ENST00000459465 62 ntBASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 MTND4LP3-201ENST00000468320 276 ntBASIC2.59□□□□□ -1.99
RHBDD3Q9Y3P4 RN7SL499P-201ENST00000481141 276 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms