Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 GSTA9P-201ENST00000406231 611 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 RPL17P49-201ENST00000443728 411 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 FAM103A2P-201ENST00000444122 354 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AL139099.1-201ENST00000497398 403 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC006390.1-201ENST00000508068 283 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 RN7SKP82-201ENST00000516786 223 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 RNU6-714P-201ENST00000516963 103 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC091516.1-201ENST00000549191 703 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC092325.1-201ENST00000566449 554 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC011468.4-201ENST00000603942 409 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC112230.1-201ENST00000604342 547 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 RNU6-87P-201ENST00000607561 108 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 MIR7702-201ENST00000621931 59 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AL354798.1-201ENST00000622505 329 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AP005264.7-201ENST00000625003 745 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 LINC02471-203ENST00000641941 4752 ntBASIC4.36□□□□□ -1.71
SSX2IPQ9Y2D8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 U8.3-201ENST00000363321 132 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RNU6-853P-201ENST00000364306 107 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RNA5SP171-201ENST00000391071 115 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RPL31P1-201ENST00000398116 372 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AL590704.1-201ENST00000402856 794 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RNU2-8P-201ENST00000410727 190 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RPL31P2-201ENST00000413849 377 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RPL31P45-201ENST00000419532 356 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 TIMM9P3-201ENST00000428659 274 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC018644.1-201ENST00000429934 551 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AL590233.1-201ENST00000430017 456 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 ARPC3P1-201ENST00000437218 533 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 SDCBPP1-201ENST00000440192 890 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RPS4XP4-201ENST00000443195 763 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 MTATP6P30-201ENST00000443540 664 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC034236.1-201ENST00000469891 373 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 MTND1P3-201ENST00000484956 952 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 HMGB1P21-201ENST00000502313 581 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC093677.1-201ENST00000514414 678 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RNU2-46P-201ENST00000517038 113 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RNU6-201P-201ENST00000517100 61 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AP003122.4-201ENST00000530980 758 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 RPS3AP4-201ENST00000555161 764 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC034268.2-201ENST00000571784 482 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 SNORA59B-202ENST00000578183 701 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 MIR5684-201ENST00000585074 65 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AC067852.4-201ENST00000590314 478 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 DUXAP4-201ENST00000603046 613 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AL355073.2-201ENST00000612106 557 ntBASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX2IPQ9Y2D8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 FRG1BP-201ENST00000278882 761 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 Y_RNA.46-201ENST00000362695 102 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 RPS3AP36-201ENST00000398190 775 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 RPL7P25-201ENST00000404151 721 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms