Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNU4-34P-201ENST00000410431 124 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 RN7SKP293-201ENST00000411389 296 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 AL160275.2-201ENST00000412010 394 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 AC008753.1-201ENST00000423096 284 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 NDUFB4P7-201ENST00000423198 363 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 AC090804.1-201ENST00000448870 490 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 RPL7AP23-201ENST00000482625 776 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 RPS29P24-201ENST00000486345 171 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 RPL36AP41-201ENST00000493820 306 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 RNA5SP165-201ENST00000517142 115 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 AC074050.1-201ENST00000563247 211 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 AC234771.5-201ENST00000600161 514 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 U1.41-201ENST00000617626 165 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 SNORA16A-202ENST00000628458 135 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 MIR3914-2-201ENST00000637339 95 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LHX6Q9UPM6 GUCY1B2-204ENST00000531898 1979 ntBASIC6.17□□□□□ -1.42
LHX6Q9UPM6 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 AP000547.3-204ENST00000588548 2523 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 SNORA11-201ENST00000408789 128 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 RPL37P18-201ENST00000411602 243 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 DEFA11P-201ENST00000446470 261 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 RN7SL187P-201ENST00000495587 303 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 AC018645.1-201ENST00000505003 109 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 RN7SKP67-201ENST00000515905 235 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 RNA5SP340-201ENST00000517132 107 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 COX6CP7-201ENST00000597056 208 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 AC092079.1-201ENST00000558620 1985 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 THAP12P9-201ENST00000503971 2360 ntBASIC6.16□□□□□ -1.42
LHX6Q9UPM6 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
LHX6Q9UPM6 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 UBE2L2-201ENST00000254302 429 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 U3.7-201ENST00000363668 216 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 RNU6-968P-201ENST00000384076 107 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 RNU6-1248P-201ENST00000391096 64 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 RPS21P8-201ENST00000413365 247 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 AL929472.1-201ENST00000417484 429 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 RPL12P18-201ENST00000437175 325 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 RNA5SP418-201ENST00000515951 117 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 RN7SKP238-201ENST00000516483 249 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 RNA5SP440-201ENST00000612665 119 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.15□□□□□ -1.42
LHX6Q9UPM6 U6.95-201ENST00000636931 70 ntBASIC6.15□□□□□ -1.42
LHX6Q9UPM6 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LHX6Q9UPM6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LHX6Q9UPM6 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LHX6Q9UPM6 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms