Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SNORA51.11-201ENST00000384442 131 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AL590664.1-201ENST00000448065 339 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 RNA5SP182-201ENST00000516064 82 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.38□□□□□ -2.03
SCN11AQ9UI33 AC132825.8-201ENST00000640783 297 ntBASIC2.38□□□□□ -2.03
SCN11AQ9UI33 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SCN11AQ9UI33 AC012321.1-201ENST00000561622 1588 ntBASIC2.37□□□□□ -2.03
SCN11AQ9UI33 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SCN11AQ9UI33 RNU2-20P-201ENST00000410425 191 ntBASIC2.37□□□□□ -2.03
SCN11AQ9UI33 AC009965.2-201ENST00000425328 970 ntBASIC2.37□□□□□ -2.03
SCN11AQ9UI33 AC027124.2-201ENST00000428249 105 ntBASIC2.37□□□□□ -2.03
SCN11AQ9UI33 XKRY2-201ENST00000442362 1093 ntBASIC2.37□□□□□ -2.03
SCN11AQ9UI33 AC140059.1-201ENST00000489238 361 ntBASIC2.37□□□□□ -2.03
SCN11AQ9UI33 AC107393.1-201ENST00000512403 346 ntBASIC2.37□□□□□ -2.03
SCN11AQ9UI33 RNU6-250P-201ENST00000516958 103 ntBASIC2.37□□□□□ -2.03
SCN11AQ9UI33 AL161713.1-201ENST00000555538 145 ntBASIC2.37□□□□□ -2.03
SCN11AQ9UI33 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.37□□□□□ -2.03
SCN11AQ9UI33 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 RPL23AP16-201ENST00000441715 421 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 RPL23AP20-201ENST00000447965 421 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AL163540.1-201ENST00000485382 386 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 TRMT112P2-201ENST00000512910 132 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 RNA5SP490-201ENST00000517141 136 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 SNORD39.2-201ENST00000579995 76 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AC020895.1-201ENST00000595362 272 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AC090425.2-201ENST00000608818 501 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AC010329.2-201ENST00000595195 2737 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AP000567.1-201ENST00000406413 156 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 SSXP9-201ENST00000417503 292 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 RN7SKP34-201ENST00000516142 244 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 HMGB1P1-201ENST00000522557 636 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AC124283.4-201ENST00000581815 456 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AP001542.2-201ENST00000593141 364 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 AL049779.4-201ENST00000604500 156 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 KATNBL1P1-201ENST00000605192 748 ntBASIC2.36□□□□□ -2.03
SCN11AQ9UI33 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.35□□□□□ -2.03
SCN11AQ9UI33 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SCN11AQ9UI33 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.35□□□□□ -2.03
SCN11AQ9UI33 RNA5SP138-201ENST00000365098 114 ntBASIC2.35□□□□□ -2.03
SCN11AQ9UI33 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN11AQ9UI33 RPL23AP76-201ENST00000441860 458 ntBASIC2.35□□□□□ -2.03
SCN11AQ9UI33 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.35□□□□□ -2.03
SCN11AQ9UI33 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.35□□□□□ -2.03
SCN11AQ9UI33 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN11AQ9UI33 AC010546.1-201ENST00000569391 485 ntBASIC2.35□□□□□ -2.03
SCN11AQ9UI33 AL121594.5-201ENST00000631724 573 ntBASIC2.35□□□□□ -2.03
SCN11AQ9UI33 AP000553.5-201ENST00000641933 54 ntBASIC2.35□□□□□ -2.03
SCN11AQ9UI33 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCN11AQ9UI33 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SCN11AQ9UI33 RNA5SP189-201ENST00000364920 115 ntBASIC2.34□□□□□ -2.03
SCN11AQ9UI33 AC240504.1-201ENST00000395709 845 ntBASIC2.34□□□□□ -2.03
SCN11AQ9UI33 MIR1323-201ENST00000408090 73 ntBASIC2.34□□□□□ -2.03
SCN11AQ9UI33 AL590762.3-201ENST00000436372 640 ntBASIC2.34□□□□□ -2.03
SCN11AQ9UI33 AL021397.1-201ENST00000451806 248 ntBASIC2.34□□□□□ -2.03
SCN11AQ9UI33 AIG1P1-201ENST00000503376 148 ntBASIC2.34□□□□□ -2.03
SCN11AQ9UI33 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN11AQ9UI33 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.34□□□□□ -2.03
SCN11AQ9UI33 PRELID2P1-201ENST00000552837 301 ntBASIC2.34□□□□□ -2.03
SCN11AQ9UI33 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SCN11AQ9UI33 CKAP2P1-201ENST00000555477 2049 ntBASIC2.34□□□□□ -2.04
SCN11AQ9UI33 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 Y_RNA.224-201ENST00000364308 111 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 SET-203ENST00000372688 801 ntTSL 2 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC023128.2-201ENST00000420880 1223 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 MTCO3P21-201ENST00000430791 643 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 HMGB1P31-201ENST00000437242 427 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC104472.2-201ENST00000469035 601 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 COX6CP5-201ENST00000527162 228 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC090751.1-201ENST00000566966 267 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AL121917.1-203ENST00000605534 577 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC010678.1-201ENST00000614118 713 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 KPNA2P1-201ENST00000458289 1591 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 SNORA67.5-201ENST00000391036 107 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC019129.1-201ENST00000403786 261 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms