Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LARP1BP1-201ENST00000506036 1359 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN1Q9P244 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN1Q9P244 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN1Q9P244 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN1Q9P244 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN1Q9P244 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 RNU1-14P-201ENST00000362759 152 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 OR5H15-201ENST00000383696 930 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AL445189.1-201ENST00000405722 338 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 RN7SKP159-201ENST00000410657 292 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 RPL27AP8-201ENST00000424277 446 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AL157831.1-201ENST00000426134 473 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 OR4C10P-201ENST00000434991 931 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 TXNP1-201ENST00000441872 371 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC016696.1-201ENST00000446949 318 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC012158.1-204ENST00000483430 465 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 RN7SL604P-201ENST00000492589 296 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC010587.1-201ENST00000505809 469 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AL592156.1-201ENST00000508758 304 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 SNORA70.16-201ENST00000516390 95 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 RNA5SP519-201ENST00000516480 119 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 CBX3P5-201ENST00000552017 521 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC012213.3-201ENST00000577199 777 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC087683.1-201ENST00000591187 441 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC068790.5-201ENST00000602741 355 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AL591034.3-201ENST00000605511 685 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AP002826.1-201ENST00000608835 315 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC006566.1-201ENST00000608943 513 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC013562.2-201ENST00000611632 603 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 FAM27D1-201ENST00000612308 341 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AL589743.7-201ENST00000612637 233 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.95□□□□□ -1.78
LRFN1Q9P244 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN1Q9P244 AC106871.1-201ENST00000568324 3102 ntBASIC3.95□□□□□ -1.78
LRFN1Q9P244 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 OR1S2-201ENST00000302592 978 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 RNU5E-1-201ENST00000362477 120 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 RNA5SP502-201ENST00000362694 119 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 RNU5A-1-201ENST00000362698 116 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 RNU6-1042P-201ENST00000384204 107 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 RNU1-44P-201ENST00000384453 163 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 MIR195-201ENST00000385194 87 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 RPL32P23-201ENST00000397237 405 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AL583835.1-201ENST00000399570 407 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 RNU2-16P-201ENST00000410712 136 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 VDAC1P9-201ENST00000412766 841 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC073614.1-201ENST00000438690 650 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 USP9YP15-201ENST00000442391 422 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 NANOGP10-201ENST00000453325 895 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 TPT1P7-201ENST00000458300 517 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 KLF3P2-201ENST00000465138 268 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC034236.1-201ENST00000469891 373 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 RPL23AP65-201ENST00000475608 468 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms