Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 RN7SKP111-201ENST00000410349 271 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 RNU6-55P-201ENST00000411092 107 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 RNU6-954P-201ENST00000411355 107 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 SPA17P1-201ENST00000416656 452 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AL513477.1-202ENST00000417061 214 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 FTH1P1-201ENST00000437933 532 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC007967.1-201ENST00000455422 1159 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AL109741.2-201ENST00000455561 343 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 MTCYBP17-201ENST00000503579 789 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 SUMO2P5-201ENST00000506790 245 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC069306.1-201ENST00000507006 843 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 SCARNA15.2-201ENST00000516409 127 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 IGKV2-26-201ENST00000518305 343 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 MTCO1P47-201ENST00000523889 1271 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 BNIP3P38-201ENST00000601117 544 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC019159.1-201ENST00000605094 187 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AL136363.1-201ENST00000605349 337 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AL158211.4-201ENST00000606988 584 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC096577.2-201ENST00000611455 153 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 MIR4275-201ENST00000636486 87 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC068647.1-201ENST00000489539 2265 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.15□□□□□ -1.9
HPF1Q9NWY4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HPF1Q9NWY4 MTND5P7-201ENST00000413558 1798 ntBASIC3.15□□□□□ -1.9
HPF1Q9NWY4 OR4G2P-202ENST00000641004 1759 ntBASIC3.15□□□□□ -1.9
HPF1Q9NWY4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HPF1Q9NWY4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AP002088.1-201ENST00000382740 395 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 MIR325-201ENST00000385260 98 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 U3.19-201ENST00000390893 196 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 SNORA11.1-201ENST00000408133 129 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AL158156.1-201ENST00000422509 473 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC018630.2-202ENST00000422992 927 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 OR2B8P-201ENST00000432841 938 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 BX679664.1-201ENST00000434429 253 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AL357552.1-201ENST00000445254 415 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 RPS3AP50-201ENST00000487064 803 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 RPL21P131-201ENST00000497298 483 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC114967.1-201ENST00000504890 259 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 XKRY-201ENST00000510392 1100 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 TTC39CP1-201ENST00000512513 755 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 APOOP4-201ENST00000513530 597 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 SNORA70.19-201ENST00000516717 90 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC026333.2-201ENST00000542164 106 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC090888.1-201ENST00000561335 1141 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC012468.1-201ENST00000604888 430 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC002550.2-201ENST00000621246 394 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.15□□□□□ -1.91
HPF1Q9NWY4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPF1Q9NWY4 AC032011.1-201ENST00000611703 1549 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HPF1Q9NWY4 RNU1-75P-201ENST00000347264 129 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 Y_RNA.234-201ENST00000364409 97 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 MIR767-201ENST00000390228 109 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 RPL21P75-201ENST00000396599 483 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 TAF9BP1-201ENST00000396646 746 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 RPL21P28-201ENST00000401418 483 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 AL592114.1-201ENST00000403842 483 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 BX323014.1-201ENST00000412876 237 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 TPMTP2-201ENST00000414372 726 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 Z85995.1-201ENST00000415547 335 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 RPL7P10-201ENST00000417407 739 ntBASIC3.14□□□□□ -1.91
HPF1Q9NWY4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms