Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 DBF4P1-201ENST00000412976 1892 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATG3Q9NT62 AC073343.1-201ENST00000328239 651 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 Y_RNA.28-201ENST00000362554 111 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 MIR506-201ENST00000384998 124 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 RNA5SP171-201ENST00000391071 115 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 AL080315.1-201ENST00000406055 466 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 AL451054.2-201ENST00000420896 202 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 AC005517.2-201ENST00000424673 553 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 AL117339.2-201ENST00000430475 180 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 TDGF1P1-201ENST00000445734 527 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 VN1R17P-201ENST00000472048 1090 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 RPL38P4-201ENST00000502376 214 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 HMGB3P16-201ENST00000508037 287 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 RNA5SP49-201ENST00000516450 115 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 AC022616.6-201ENST00000520479 119 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 PTP4A1P6-201ENST00000531034 478 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 SNRPGP18-201ENST00000553000 214 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 RN7SL435P-201ENST00000584418 282 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 AP001330.4-201ENST00000604350 154 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 AC005014.2-201ENST00000607795 599 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 HMGB1P24-202ENST00000615653 685 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 AL354950.2-201ENST00000617939 290 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 CASC19-204ENST00000641001 2055 ntBASIC5.71□□□□□ -1.5
ATG3Q9NT62 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG3Q9NT62 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG3Q9NT62 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG3Q9NT62 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG3Q9NT62 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATG3Q9NT62 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG3Q9NT62 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC022031.1-201ENST00000585985 2593 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG3Q9NT62 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG3Q9NT62 RNU4-1-201ENST00000363925 141 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 RNU6-657P-201ENST00000383904 107 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 RNU4-61P-201ENST00000411243 107 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AL590609.2-201ENST00000421430 368 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AL353597.2-202ENST00000434901 373 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AL137792.2-201ENST00000443484 235 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC034236.1-201ENST00000469891 373 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 RN7SL604P-201ENST00000492589 296 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 NPM1P41-201ENST00000512920 831 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC104136.1-201ENST00000512969 394 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 RN7SKP283-201ENST00000517197 270 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC022861.1-201ENST00000522981 663 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC110743.1-201ENST00000584870 478 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 Z84480.1-201ENST00000605131 311 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 AC244517.12-201ENST00000623581 663 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 MUC2-202ENST00000613187 4845 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG3Q9NT62 AL022322.2-201ENST00000624072 20397 ntBASIC5.7□□□□□ -1.5
ATG3Q9NT62 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG3Q9NT62 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC112198.2-201ENST00000426589 6996 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG3Q9NT62 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC006020.1-201ENST00000420179 1854 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 OR51H2P-202ENST00000641424 3046 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 Y_RNA.188-201ENST00000363952 111 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 RNU2-8P-201ENST00000410727 190 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 EIF4A1P3-201ENST00000411521 244 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC019097.1-201ENST00000424783 735 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 RPL7P4-203ENST00000430239 730 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 RPL23AP30-201ENST00000432419 501 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms