Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 THAP5P1-201ENST00000439089 262 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 DDX3P2-201ENST00000446138 111 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 MTND2P28-201ENST00000457540 1044 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 SNORD105B-201ENST00000458770 79 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-717P-201ENST00000459076 104 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 snoU13.1-201ENST00000459157 104 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 RPL32P14-201ENST00000463196 378 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC104435.1-201ENST00000483483 166 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 RN7SL170P-201ENST00000487098 295 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 HIGD1AP14-201ENST00000507617 282 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC112673.1-201ENST00000513168 575 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 HIGD1AP5-201ENST00000529959 259 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC090502.2-201ENST00000549267 280 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC137768.1-201ENST00000549998 553 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC084824.1-201ENST00000550917 1005 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC135628.1-201ENST00000568867 534 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 HMGN2P15-201ENST00000585707 270 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 ZNF861P-201ENST00000588126 639 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC006116.10-201ENST00000591836 581 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 VN1R85P-201ENST00000601587 426 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC245100.7-201ENST00000609678 442 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AL450472.3-201ENST00000615578 367 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 MIR8059-201ENST00000620427 81 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC068057.2-201ENST00000624047 895 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AL512506.2-201ENST00000624472 458 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 MTND5P1-201ENST00000445440 1375 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AC092593.1-201ENST00000515413 1815 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 AL354685.2-201ENST00000448218 1447 ntBASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42SE1Q9NRR8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 RN7SKP184-201ENST00000362348 333 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 RNA5SP305-201ENST00000362665 119 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-353P-201ENST00000364266 108 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 MIR431-201ENST00000385266 114 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 RNA5SP178-201ENST00000410380 128 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC023141.4-201ENST00000412031 328 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 BOLA3P4-201ENST00000418151 400 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AL109913.1-201ENST00000421173 514 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 RPL23AP83-201ENST00000434984 473 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AL451074.3-201ENST00000437709 472 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AL049734.2-201ENST00000441066 616 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 PIGFP3-201ENST00000441918 722 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 MTND3P4-201ENST00000453537 303 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 PMCHL2-203ENST00000457791 237 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 KLF3P2-201ENST00000465138 268 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 DYNLL1P5-201ENST00000467158 270 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC091959.2-201ENST00000477363 321 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC098818.1-201ENST00000478593 252 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC022447.3-201ENST00000506865 495 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 MRPS17P9-201ENST00000511924 393 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 RNU5F-8P-201ENST00000515941 111 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-1256P-201ENST00000516539 103 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AP002748.2-201ENST00000528671 348 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC124947.2-202ENST00000552735 133 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC087465.1-201ENST00000560574 245 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 GTF2IP8-201ENST00000560687 584 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 MIR3691-201ENST00000578066 90 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 MIR4666A-201ENST00000580160 79 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC022662.1-201ENST00000580252 331 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 MIR5187-201ENST00000583479 76 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AC006116.5-201ENST00000591936 559 ntBASIC1.3□□□□□ -2.2
CDC42SE1Q9NRR8 AL355877.2-201ENST00000603670 358 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms