Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 HSPE1P12-201ENST00000412576 301 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 RPL30P2-201ENST00000414021 291 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC108032.1-201ENST00000416706 207 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 RPS15AP6-201ENST00000420703 385 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 BX890604.2-201ENST00000427883 474 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 RPL35AP22-201ENST00000436855 335 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AL138878.2-201ENST00000440581 1241 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 RPL21P89-201ENST00000444021 467 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AP000936.2-201ENST00000447151 681 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 RPL31P3-201ENST00000458430 332 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 OR9M1P-201ENST00000459641 921 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 RN7SL303P-201ENST00000469773 251 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC108475.1-201ENST00000507880 950 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC091965.2-201ENST00000512324 613 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 MTND5P13-201ENST00000513046 1079 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC022878.1-201ENST00000530684 149 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AP003122.4-201ENST00000530980 758 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AP000857.1-201ENST00000532151 543 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AL845331.3-202ENST00000562856 261 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC022968.1-201ENST00000567372 442 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC099489.2-201ENST00000574976 260 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC105224.1-201ENST00000587055 421 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC112191.3-201ENST00000604371 277 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC007038.2-201ENST00000608095 740 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AL592295.2-201ENST00000612578 206 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 TUG1_2.1-201ENST00000614234 87 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AL110115.1-201ENST00000614396 364 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC009878.1-201ENST00000621819 340 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AL603839.4-201ENST00000624658 1005 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 AC099654.13-201ENST00000639774 207 ntBASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHMP1AQ9HD42 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 DEFB108F-201ENST00000344638 222 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 RNVU1-6-201ENST00000364688 164 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 SNORA23-201ENST00000365128 182 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 RNY3P10-201ENST00000384764 102 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 MIR192-201ENST00000384915 110 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 U3.42-201ENST00000408746 214 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 HMGN1P24-201ENST00000412282 298 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 MTCO2P16-201ENST00000436962 677 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 MTND4P32-201ENST00000437189 1237 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 SNORA71B-202ENST00000439232 272 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 HMGB1P37-201ENST00000439613 609 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AL162389.1-201ENST00000449233 177 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 RNA5SP269-201ENST00000459032 137 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AC011276.1-201ENST00000469688 323 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AP002884.2-201ENST00000471647 395 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 RPL23AP41-201ENST00000484754 458 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 RPS15AP36-201ENST00000492022 382 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 Y_RNA.695-201ENST00000516715 107 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 ERHP1-201ENST00000523006 310 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 HSPE1P5-201ENST00000561489 272 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 ZNF415P1-201ENST00000582279 1166 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AC080013.6-201ENST00000606185 215 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms