Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU6-356P-201ENST00000384140 107 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 MIR181A1-201ENST00000385026 110 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AL078595.1-201ENST00000404458 226 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AL603766.1-201ENST00000407763 664 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 SPA17P1-201ENST00000416656 452 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 BX295541.1-201ENST00000417774 250 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 RWDD4P2-201ENST00000426392 563 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 KCTD9P3-201ENST00000434597 1169 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 RPL22P17-201ENST00000438729 315 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 RPS4XP4-201ENST00000443195 763 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 PPIAP3-201ENST00000450588 505 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC099563.1-201ENST00000456086 418 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 RPS3AP17-201ENST00000472594 777 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 KCTD9P5-201ENST00000504141 1170 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 HIGD1AP3-201ENST00000515857 278 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 IGKV2D-36-201ENST00000518643 226 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC022616.6-201ENST00000520479 119 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 DEFB109D-201ENST00000529497 240 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC034268.2-201ENST00000571784 482 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 UBE2L4-201ENST00000587688 464 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AL451044.1-201ENST00000604867 238 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 RNU6-87P-201ENST00000607561 108 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AC009159.1-201ENST00000618386 642 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AL158801.5-201ENST00000623123 465 ntBASIC4.12□□□□□ -1.75
USP29Q9HBJ7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP29Q9HBJ7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 GNG5P1-201ENST00000255500 204 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 RNA5SP258-201ENST00000362750 119 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 RNA5SP130-201ENST00000364431 114 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 Y_RNA.248-201ENST00000364501 109 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 RNU6-1207P-201ENST00000384343 107 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 RNU11-4P-201ENST00000391149 133 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL138878.1-201ENST00000405131 347 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 RPL21P65-201ENST00000406094 466 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 FCF1P10-201ENST00000407590 479 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 RNU6-195P-201ENST00000411352 109 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 HSPE1P12-201ENST00000412576 301 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 RPS12P23-201ENST00000419579 400 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 USP9YP36-201ENST00000424581 829 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 USP9YP18-201ENST00000425912 695 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC007389.2-201ENST00000434630 306 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC079448.1-201ENST00000449377 373 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL353691.1-201ENST00000451332 387 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 RPL38P1-201ENST00000460914 211 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 VN1R105P-201ENST00000486595 910 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC114967.1-201ENST00000504890 259 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 TMEM248P1-201ENST00000510579 951 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC005798.1-201ENST00000513715 387 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 Y_RNA.672-201ENST00000516289 104 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 RNU6-1178P-201ENST00000516674 107 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 MIR3682-201ENST00000581338 84 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL606834.2-201ENST00000602954 668 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL365503.1-201ENST00000605247 905 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC092954.2-201ENST00000609103 430 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL391813.2-201ENST00000609113 322 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AL355472.4-201ENST00000610233 626 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 CR381653.2-201ENST00000624041 768 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC068880.5-201ENST00000624331 290 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms