Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MTCO2P23-201ENST00000425216 680 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AC092648.1-201ENST00000425870 423 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AC093151.1-201ENST00000427711 313 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 ATP5F1P1-201ENST00000433775 569 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 SNRPEP4-201ENST00000435815 279 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 RPL21P134-201ENST00000453468 483 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 BX322784.1-201ENST00000455793 1077 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AC091179.1-201ENST00000461606 579 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 RPL31P50-201ENST00000471002 296 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 RN7SL20P-201ENST00000488827 297 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AP001804.3-201ENST00000525146 880 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 DEFB131D-201ENST00000526803 184 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 CYCSP2-201ENST00000558168 301 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AC090615.1-201ENST00000577519 154 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AL357080.1-201ENST00000617394 239 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 MIR6075-201ENST00000620782 95 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AL445264.1-201ENST00000621719 171 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AC116618.1-201ENST00000634617 774 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AL353743.1-202ENST00000431724 1695 ntBASIC3.23□□□□□ -1.89
DDX47Q9H0S4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
DDX47Q9H0S4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 Y_RNA.465-201ENST00000384293 102 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 MIR490-201ENST00000384865 128 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 RPS3AP24-201ENST00000407896 734 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 RNA5SP344-201ENST00000411081 104 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 NANOGP5-201ENST00000424456 877 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 MTATP6P4-201ENST00000427725 675 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 DPPA2P1-201ENST00000428060 556 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AC091286.1-201ENST00000431233 461 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AC004854.1-201ENST00000440356 349 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AL121871.1-201ENST00000443413 436 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AL359385.1-201ENST00000456509 365 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 RPL21P41-201ENST00000459863 264 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AP004217.1-201ENST00000480579 346 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 WBP1LP4-201ENST00000505043 344 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AC021146.8-201ENST00000507455 733 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AC109445.1-201ENST00000512356 383 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 PRELID3BP8-201ENST00000604148 295 ntBASIC3.22□□□□□ -1.89
DDX47Q9H0S4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
DDX47Q9H0S4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC099786.3-201ENST00000565735 1410 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 ZNF29P-201ENST00000225587 168 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 Y_RNA.234-201ENST00000364409 97 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 RNU6-1242P-201ENST00000391052 103 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 MIR1284-201ENST00000408337 120 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 RN7SKP58-201ENST00000411010 305 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 RPS29P4-201ENST00000414733 161 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC069157.1-201ENST00000421749 137 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 USP9YP36-201ENST00000424581 829 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AL009048.1-201ENST00000450437 298 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 ELOCP23-201ENST00000452014 332 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 RPL7P23-201ENST00000493874 747 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC109464.2-201ENST00000510242 943 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC116353.3-201ENST00000511215 249 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms