Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 RNU6ATAC-201ENST00000408749 126 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 RPL31P2-201ENST00000413849 377 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 HMGB3P20-201ENST00000417997 600 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC112653.1-201ENST00000443851 386 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 MTND1P12-201ENST00000455231 147 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AP1S2P1-201ENST00000457344 379 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC022034.3-201ENST00000471393 478 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC087385.1-201ENST00000475062 312 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 PPIAP15-201ENST00000479662 484 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC007182.2-201ENST00000489251 402 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 Y_RNA.704-201ENST00000516851 102 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 RNU6-445P-201ENST00000516949 107 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC109635.3-201ENST00000529536 185 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC091516.1-201ENST00000549191 703 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AL157687.1-201ENST00000554853 619 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 MIR3118-1-201ENST00000581787 76 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 UBE2L4-201ENST00000587688 464 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC025588.3-201ENST00000604182 274 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 LARP7P1-201ENST00000605576 316 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 MIR92B-201ENST00000607575 96 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC017083.3-201ENST00000609955 700 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AL355472.4-201ENST00000610233 626 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC069234.5-201ENST00000611056 416 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC012150.2-201ENST00000621300 544 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AL354798.1-201ENST00000622505 329 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AL158801.5-201ENST00000623123 465 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AC091953.2-201ENST00000623979 160 ntBASIC4.09□□□□□ -1.75
CIPCQ9C0C6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
CIPCQ9C0C6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CIPCQ9C0C6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.09□□□□□ -1.76
CIPCQ9C0C6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
CIPCQ9C0C6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 RNU6-534P-201ENST00000364877 106 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 RNU6-1207P-201ENST00000384343 107 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AL590704.1-201ENST00000402856 794 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 RNU2-8P-201ENST00000410727 190 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AL450326.2-201ENST00000421913 1962 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 RPL30P3-201ENST00000424262 333 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC007389.2-201ENST00000434630 306 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC127537.2-201ENST00000439258 465 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 DPPA3P1-201ENST00000448050 469 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 EIF4A1P11-201ENST00000451239 222 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AL139099.1-201ENST00000497398 403 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 NUP58P1-201ENST00000502546 1738 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 Y_RNA.693-201ENST00000516641 110 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 Vault.3-201ENST00000516676 95 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 RNA5SP179-201ENST00000517284 121 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC107934.1-201ENST00000522215 217 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AL356432.3-201ENST00000568952 465 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC007363.1-201ENST00000604736 620 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC091167.4-201ENST00000605079 184 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 MIR98-201ENST00000606724 119 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC008536.2-201ENST00000607284 349 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AL161734.1-201ENST00000609720 557 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC025253.1-201ENST00000613623 543 ntBASIC4.08□□□□□ -1.76
CIPCQ9C0C6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CIPCQ9C0C6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms