Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 MED28P6-201ENST00000558776 231 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 MIR7106-201ENST00000612419 65 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC135507.2-201ENST00000612443 309 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 HMGB1P24-202ENST00000615653 685 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC090116.1-201ENST00000615679 446 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC073968.1-201ENST00000618594 637 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC012640.5-201ENST00000623897 319 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 CRYM-AS1-204ENST00000637983 556 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 MFSD8-245ENST00000641743 948 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 RNU6-543P-201ENST00000362576 108 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 U8.8-201ENST00000365399 135 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 SNORA9-201ENST00000384215 133 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 MIR7-1-201ENST00000384871 110 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 MIR483-201ENST00000385070 76 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 U3.29-201ENST00000391296 212 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL162578.1-201ENST00000406202 378 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL355497.1-201ENST00000406262 551 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 U3.37-201ENST00000408528 213 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL512504.1-201ENST00000415494 778 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 COTL1P1-201ENST00000422309 375 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC006946.1-201ENST00000429106 328 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC112220.1-201ENST00000434628 355 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 MRPS33P4-201ENST00000434892 317 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 FABP5P3-201ENST00000437960 408 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC107083.1-201ENST00000439643 279 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC011816.1-201ENST00000441346 546 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL135938.1-201ENST00000443141 297 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 RNU7-26P-201ENST00000458980 63 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC090515.1-201ENST00000465295 476 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC011825.1-201ENST00000484967 388 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 RPS27P21-201ENST00000486977 252 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC006445.2-201ENST00000510061 472 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 OR5BM1P-201ENST00000512021 366 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC113192.3-201ENST00000529152 742 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMD2Q9BT23 HMGB1P14-201ENST00000557424 591 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC025281.1-201ENST00000567026 265 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 HMGB1P6-201ENST00000569046 646 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 FAM60BP-201ENST00000578364 658 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 CBX3P2-202ENST00000583365 535 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC012468.1-201ENST00000604888 430 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL109659.3-201ENST00000624985 950 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AL137790.1-201ENST00000634283 177 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 BX649567.1-201ENST00000642071 1134 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 AC009812.4-201ENST00000569134 1805 ntBASIC1.5□□□□□ -2.17
LIMD2Q9BT23 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AL137003.2-201ENST00000606924 2538 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 CR848007.1-201ENST00000442354 1699 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 HMGB1P5-201ENST00000255320 642 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 RNU6-461P-201ENST00000364195 107 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 RNU6-152P-201ENST00000384037 107 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 MIR493-201ENST00000385254 89 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AL139039.1-201ENST00000401900 692 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 MTND1P23-201ENST00000416931 372 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 RPL27AP8-201ENST00000424277 446 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC063976.3-201ENST00000426849 329 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC079780.1-201ENST00000428259 207 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 SRIP2-201ENST00000428470 166 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 ARL5AP4-201ENST00000430731 512 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 RPL23AP83-201ENST00000434984 473 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 CYCSP32-201ENST00000440548 321 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 RPL37P4-201ENST00000448908 268 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC015724.1-201ENST00000478577 156 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AL135752.1-201ENST00000479477 471 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC022493.1-201ENST00000492984 337 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC090255.1-201ENST00000495779 349 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC097462.2-201ENST00000504623 481 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 CBX3P3-201ENST00000508108 532 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC087272.1-201ENST00000523624 533 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms