Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 OR5AK1P-201ENST00000524837 922 ntBASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.21□□□□□ -1.74
SIN3AQ96ST3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AC090888.1-201ENST00000561335 1141 ntBASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AL109653.1-201ENST00000603091 248 ntBASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AL603755.1-201ENST00000619504 163 ntBASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AC092650.2-201ENST00000619984 902 ntBASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AC079248.2-201ENST00000623779 326 ntBASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AC009039.2-201ENST00000624524 529 ntBASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AC092184.1-201ENST00000625042 715 ntBASIC4.21□□□□□ -1.74
SIN3AQ96ST3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.21□□□□□ -1.74
SIN3AQ96ST3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIN3AQ96ST3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIN3AQ96ST3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 SNORA4.1-201ENST00000364263 144 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 RNU6-1226P-201ENST00000384317 107 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 RNU5A-2P-201ENST00000384337 116 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AL135938.1-201ENST00000443141 297 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 NANOGNBP1-201ENST00000448444 480 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC087385.1-201ENST00000475062 312 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC068305.1-201ENST00000497406 726 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 MTCYBP17-201ENST00000503579 789 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 Y_RNA.688-201ENST00000516565 95 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AL512347.1-201ENST00000566420 503 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 ISCA1P3-201ENST00000577104 373 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC067852.4-201ENST00000590314 478 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC006270.3-201ENST00000605967 1036 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 VIS1.1-201ENST00000610517 203 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC093783.1-201ENST00000612976 329 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AL136981.2-201ENST00000617319 734 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 AC018816.2-201ENST00000621460 353 ntBASIC4.2□□□□□ -1.74
SIN3AQ96ST3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIN3AQ96ST3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AL390862.1-201ENST00000635467 1469 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AP001486.2-201ENST00000561652 5113 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AL672296.1-201ENST00000427780 2158 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 RNU1-35P-201ENST00000362782 153 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AL159169.1-201ENST00000421119 127 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 MTND4P20-201ENST00000424125 869 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AC096632.1-201ENST00000427395 310 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 RPL23AP16-201ENST00000441715 421 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 RPL37P6-202ENST00000464216 403 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 TMED11P-201ENST00000479478 690 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AP000926.1-201ENST00000479573 241 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AP004217.1-201ENST00000480579 346 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 Vault.1-201ENST00000516474 102 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AC022790.1-201ENST00000522872 204 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 H3F3AP1-201ENST00000559984 334 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AC090616.2-202ENST00000584248 222 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 AC018714.1-201ENST00000605028 208 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 MIR3974-201ENST00000637126 96 ntBASIC4.19□□□□□ -1.74
SIN3AQ96ST3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.19□□□□□ -1.74
SIN3AQ96ST3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIN3AQ96ST3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
SIN3AQ96ST3 MIR483-201ENST00000385070 76 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms