Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 TMEM251P1-201ENST00000503717 318 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC021678.1-201ENST00000505195 936 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 HMGB1P28-201ENST00000507778 552 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 SNORA31.8-201ENST00000516327 108 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 Y_RNA.717-201ENST00000517106 92 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC027309.2-201ENST00000520566 192 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 EEF1A1P37-201ENST00000522748 715 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC005832.3-201ENST00000537929 631 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC125611.1-201ENST00000549563 229 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 HIGD1AP17-201ENST00000554576 276 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AL353778.1-201ENST00000603149 408 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 RPL23AP88-201ENST00000605759 454 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC007349.4-201ENST00000608114 532 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC004696.1-201ENST00000614345 607 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC009159.2-201ENST00000617603 606 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AP000484.1-201ENST00000620067 1252 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC009318.4-201ENST00000620496 486 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC011330.2-201ENST00000621680 635 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC039056.2-201ENST00000622261 511 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC109454.4-201ENST00000623411 649 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC095031.1-201ENST00000623685 672 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00477Q96M19 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00477Q96M19 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00477Q96M19 MAPK10-266ENST00000641066 6555 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC107982.1-201ENST00000507171 1300 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00477Q96M19 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00477Q96M19 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00477Q96M19 AL353743.1-202ENST00000431724 1695 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00477Q96M19 RNA5SP258-201ENST00000362750 119 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RNU6-560P-201ENST00000364007 108 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 SNORD82-201ENST00000365530 70 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RNU6-339P-201ENST00000384310 107 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 MIR490-201ENST00000384865 128 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 U3.29-201ENST00000391296 212 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RPL21P75-201ENST00000396599 483 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00477Q96M19 RPL21P28-201ENST00000401418 483 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AL121978.1-201ENST00000402778 359 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AL592114.1-201ENST00000403842 483 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RNU6-757P-201ENST00000410334 100 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC063979.1-201ENST00000415539 377 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 SSXP9-201ENST00000417503 292 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 USP9YP11-201ENST00000427537 717 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 USP9YP22-201ENST00000438971 294 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 COX6CP2-201ENST00000444980 225 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 PDSS1P2-201ENST00000449397 678 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC005297.2-201ENST00000450430 606 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RPL21P10-201ENST00000463521 490 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RPL21P39-201ENST00000463605 483 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RPL21P93-201ENST00000480465 489 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC233702.1-201ENST00000482905 502 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC087190.1-201ENST00000484462 480 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC093591.1-201ENST00000491435 481 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RPL21P129-201ENST00000491732 478 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RPL21P16-201ENST00000495531 483 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC116353.3-201ENST00000511215 249 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 RNU6-311P-201ENST00000516224 102 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 OR4A45P-201ENST00000529954 901 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC007458.1-201ENST00000542812 373 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 MTND4P33-201ENST00000556706 766 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 MIR2682-201ENST00000580305 110 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 AL031985.2-201ENST00000600955 480 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC069304.2-201ENST00000605154 435 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 Z99289.3-201ENST00000605586 594 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC040168.1-201ENST00000623594 991 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AL512506.2-201ENST00000624472 458 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 AC068620.4-201ENST00000636730 1182 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms