Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HDAC11Q96DB2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDAC11Q96DB2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.58□□□□□ -1.84
HDAC11Q96DB2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
HDAC11Q96DB2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDAC11Q96DB2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HDAC11Q96DB2 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
HDAC11Q96DB2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDAC11Q96DB2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 RNU6-462P-201ENST00000362659 105 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 Y_RNA.548-201ENST00000384656 105 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AP000567.1-201ENST00000406413 156 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC010099.3-201ENST00000423896 409 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC004866.2-201ENST00000438285 481 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AL121871.1-201ENST00000443413 436 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 OR6K5P-201ENST00000447050 945 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC106707.2-201ENST00000484182 374 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC087359.1-201ENST00000508335 1740 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 RN7SKP13-201ENST00000515933 244 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC103843.2-201ENST00000530523 682 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC021755.1-201ENST00000559747 1447 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC037471.2-201ENST00000564941 598 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 RNU6-88P-201ENST00000606801 100 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC058791.1-201ENST00000608412 3198 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC063944.3-201ENST00000609969 533 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AC087683.2-201ENST00000611384 326 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 PLCE1P1-201ENST00000622094 305 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 AL357559.1-201ENST00000622228 274 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 SNORA50A-202ENST00000629536 136 ntBASIC3.57□□□□□ -1.84
HDAC11Q96DB2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.57□□□□□ -1.84
HDAC11Q96DB2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 RNU6-97P-201ENST00000363387 104 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 RNU6-744P-201ENST00000365557 107 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 RNU6-1316P-201ENST00000384242 108 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 MIR320C1-201ENST00000408566 88 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 RNU2-43P-201ENST00000410306 190 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 RN7SKP111-201ENST00000410349 271 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 YPEL5P1-201ENST00000419731 367 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AL022400.1-201ENST00000423946 935 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 BX119904.4-201ENST00000424402 301 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 ATP5JP1-201ENST00000431631 322 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AL354941.1-201ENST00000438600 464 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AL109741.2-201ENST00000455561 343 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 RPS4XP2-201ENST00000458402 793 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 U3.44-201ENST00000458938 192 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 RPL30P9-201ENST00000465586 330 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 HSPE1P23-201ENST00000509838 286 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 ARL2BPP6-201ENST00000512757 439 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AC010265.1-201ENST00000513509 211 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 SNORA3.4-201ENST00000515969 96 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AP003461.1-201ENST00000528866 78 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC11Q96DB2 TGIF1P1-201ENST00000558095 802 ntBASIC3.56□□□□□ -1.84
HDAC11Q96DB2 MED28P6-201ENST00000558776 231 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms