Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU6-223P-201ENST00000362830 107 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 RNA5SP283-201ENST00000365604 119 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC098592.1-201ENST00000419352 333 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC018630.2-202ENST00000422992 927 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AL591419.1-201ENST00000427423 339 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 RPL21P89-201ENST00000444021 467 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC114755.5-201ENST00000447760 831 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC020893.1-201ENST00000502452 580 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC114967.1-201ENST00000504890 259 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 HSPE1P23-201ENST00000509838 286 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 GMPSP1-201ENST00000514075 579 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 RNU2-27P-201ENST00000516185 142 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 IGHV3-76-201ENST00000522465 295 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC023538.1-201ENST00000534576 736 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 RPL23AP84-201ENST00000571193 464 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 UBE2L4-201ENST00000587688 464 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 RNU1-30P-201ENST00000606575 163 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC090132.2-201ENST00000615881 347 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC022149.2-201ENST00000621061 203 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AL357559.1-201ENST00000622228 274 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AL158801.5-201ENST00000623123 465 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS33AQ96AX1 AC104454.1-201ENST00000421341 1401 ntBASIC3.43□□□□□ -1.86
VPS33AQ96AX1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 SRP72P2-201ENST00000344851 1979 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 TPTE2P4-201ENST00000258589 1605 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 MAPK10-322ENST00000641485 4530 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 Y_RNA.302-201ENST00000364997 102 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 SNORA62-201ENST00000365493 153 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 MIR30B-201ENST00000384850 88 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 MIR514A1-201ENST00000385133 98 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 SKINT1L-201ENST00000401057 817 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 RPL7L1P10-201ENST00000427790 463 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 TAAR7P-201ENST00000436141 242 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AL008629.1-201ENST00000438615 184 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AP1S2P1-201ENST00000457344 379 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC021146.5-201ENST00000503544 545 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 RNU6-798P-201ENST00000516912 103 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC007991.1-201ENST00000522680 631 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AP004247.1-201ENST00000531556 1289 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 CYCSP30-201ENST00000546447 172 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC011602.1-201ENST00000546484 331 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC037471.2-201ENST00000564941 598 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC060771.1-201ENST00000582031 164 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AP000811.1-201ENST00000603803 651 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC013476.2-201ENST00000614456 459 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC027309.3-201ENST00000623419 351 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC019226.1-201ENST00000625666 515 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC099063.3-201ENST00000642066 185 ntBASIC3.42□□□□□ -1.86
VPS33AQ96AX1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS33AQ96AX1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AP002088.1-201ENST00000382740 395 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 RNU6-432P-201ENST00000384196 109 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 U3.39-201ENST00000408569 239 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AL359704.1-201ENST00000411586 781 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC245054.1-201ENST00000420944 258 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC010099.3-201ENST00000423896 409 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC008850.1-201ENST00000427546 362 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms