Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HPS3Q969F9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS3Q969F9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS3Q969F9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HPS3Q969F9 RNU5A-8P-201ENST00000364102 114 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HPS3Q969F9 RNU6-637P-201ENST00000384050 107 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HPS3Q969F9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 RNU6-195P-201ENST00000411352 109 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 FCF1P9-201ENST00000412546 282 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 RAC1P3-201ENST00000416129 580 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS3Q969F9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS3Q969F9 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS3Q969F9 OR4K11P-201ENST00000431829 904 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS3Q969F9 AL136380.1-201ENST00000447970 162 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS3Q969F9 MTCO3P20-201ENST00000454926 688 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 RNU7-59P-201ENST00000459101 61 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.48□□□□□ -1.69
HPS3Q969F9 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.48□□□□□ -1.69
HPS3Q969F9 RPL7P23-201ENST00000493874 747 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 RPL29P14-201ENST00000495837 428 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 AC010587.1-201ENST00000505809 469 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS3Q969F9 Vault.3-201ENST00000516676 95 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS3Q969F9 AC016957.1-201ENST00000534895 309 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS3Q969F9 AC018630.1-201ENST00000541376 925 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.48□□□□□ -1.69
HPS3Q969F9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS3Q969F9 AC025627.2-201ENST00000576220 160 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS3Q969F9 AP003465.2-201ENST00000602571 373 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 AC025946.2-201ENST00000603398 234 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS3Q969F9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS3Q969F9 AC068137.3-201ENST00000639191 341 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 AC073869.6-201ENST00000640656 341 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS3Q969F9 AL138713.1-201ENST00000624026 2130 ntBASIC4.48□□□□□ -1.69
HPS3Q969F9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HPS3Q969F9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS3Q969F9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS3Q969F9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS3Q969F9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS3Q969F9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS3Q969F9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS3Q969F9 AL365440.1-201ENST00000436135 2167 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AC007685.1-201ENST00000329806 452 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 RNU6-1155P-201ENST00000363554 107 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 RN7SKP226-201ENST00000364912 300 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 RNU6-432P-201ENST00000384196 109 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 RNU6-517P-201ENST00000384362 110 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 SNORD3H-201ENST00000384486 214 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 SNORA70C-201ENST00000384538 135 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS3Q969F9 SNORA3C-201ENST00000408792 125 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 RNU2-62P-201ENST00000410868 191 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS3Q969F9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS3Q969F9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.47□□□□□ -1.69
HPS3Q969F9 USP9YP36-201ENST00000424581 829 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 AC137499.1-201ENST00000427602 88 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS3Q969F9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.47□□□□□ -1.69
HPS3Q969F9 TIMM9P1-201ENST00000436122 256 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 FTH1P1-201ENST00000437933 532 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 AC093156.1-201ENST00000440382 670 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS3Q969F9 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.47□□□□□ -1.69
HPS3Q969F9 TPT1P14-201ENST00000448018 505 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.47□□□□□ -1.69
HPS3Q969F9 RBM43P1-201ENST00000476891 1081 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AC020593.1-201ENST00000507399 299 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 AC091133.4-201ENST00000511142 308 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 MTCO1P35-201ENST00000515270 228 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 AC107934.1-201ENST00000522215 217 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AL133271.1-201ENST00000538229 291 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.47□□□□□ -1.69
HPS3Q969F9 OR4K8P-201ENST00000578842 1048 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AC068790.5-201ENST00000602741 355 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 AL139395.1-201ENST00000603662 160 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 MIR6867-201ENST00000610636 67 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 MIR6868-201ENST00000611215 58 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 MIR4727-201ENST00000622232 55 ntBASIC4.47□□□□□ -1.69
HPS3Q969F9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS3Q969F9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms