Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 RPL23AP35-201ENST00000451906 501 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 RPL30P9-201ENST00000465586 330 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 POU5F1P7-201ENST00000508759 541 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AC024589.1-201ENST00000512207 263 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 RNU6-714P-201ENST00000516963 103 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 MRPS36P3-201ENST00000519284 130 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 MED28P6-201ENST00000558776 231 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AL391001.1-201ENST00000602747 715 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AC022022.2-201ENST00000602989 360 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AL607023.1-201ENST00000620045 248 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 AC103706.2-201ENST00000638080 240 ntBASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.31□□□□□ -1.88
CKAP2Q8WWK9 MTND5P19-201ENST00000424872 1794 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC092326.2-201ENST00000624772 1561 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC011477.1-204ENST00000623416 1325 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AL161781.1-201ENST00000354277 403 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 RNA5SP197-201ENST00000363357 119 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 SNORA48.7-201ENST00000391302 135 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 RNU2-43P-201ENST00000410306 190 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC083875.1-201ENST00000419509 405 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 SDCBPP3-201ENST00000419629 891 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 TXNL1P1-201ENST00000429528 554 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AL445584.1-201ENST00000431451 330 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AL117351.1-201ENST00000438864 766 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 OR6K5P-201ENST00000447050 945 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 PAXBP1P1-201ENST00000449315 447 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC234775.1-201ENST00000454247 670 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 RPS23P3-201ENST00000470993 430 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC017015.1-201ENST00000477387 286 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC147055.4-201ENST00000504399 745 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 IGHV3-76-201ENST00000522465 295 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AL391156.1-201ENST00000554965 554 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC006539.2-201ENST00000601729 572 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC106900.2-201ENST00000604994 317 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC012443.1-201ENST00000605605 231 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC013244.3-201ENST00000605614 388 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC099778.2-201ENST00000610904 211 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 uc_338.1-201ENST00000612113 180 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC079395.3-201ENST00000615161 484 ntBASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CKAP2Q8WWK9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 RNU6-97P-201ENST00000363387 104 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 RNA5SP51-201ENST00000364750 119 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 RNU6-1207P-201ENST00000384343 107 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 AL136372.1-201ENST00000403060 228 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 AL356421.1-201ENST00000403255 413 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 MIR320C1-201ENST00000408566 88 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 AC024082.2-201ENST00000434771 238 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 AC244505.4-201ENST00000434905 287 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 SNRPEP4-201ENST00000435815 279 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 THAP5P1-201ENST00000439089 262 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 MTCYBP34-201ENST00000439552 670 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 SSXP5-201ENST00000443473 287 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 UQCRHP3-201ENST00000451503 251 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 ARPC3P2-201ENST00000457786 533 ntBASIC3.29□□□□□ -1.88
CKAP2Q8WWK9 AC104563.1-201ENST00000476147 376 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms