Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNA5SP373-201ENST00000517271 95 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AP004607.2-201ENST00000533949 322 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AC063949.1-201ENST00000552900 865 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 MIR4330-201ENST00000579077 105 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AC006363.1-201ENST00000603806 463 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AL590240.4-201ENST00000616908 390 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AC009962.1-201ENST00000567327 3813 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
NKX2-3Q8TAU0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
NKX2-3Q8TAU0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NKX2-3Q8TAU0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NKX2-3Q8TAU0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 Y_RNA.398-201ENST00000383952 99 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 U3.39-201ENST00000408569 239 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 RPL19P1-201ENST00000411635 428 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 AC245028.1-201ENST00000423259 256 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 NDUFB4P8-201ENST00000435351 367 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 AL513124.1-201ENST00000450410 614 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 RN7SL447P-201ENST00000494711 245 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 RPL23AP55-201ENST00000498163 452 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 SNRPCP2-201ENST00000504370 475 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 RBBP4P6-201ENST00000508098 202 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 SULT1C2P2-201ENST00000562517 294 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 AC108706.1-201ENST00000611053 297 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 AL365222.1-201ENST00000614661 98 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.46□□□□□ -1.38
NKX2-3Q8TAU0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AP000560.1-201ENST00000624150 1937 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC114774.1-201ENST00000507410 1770 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 Y_RNA.76-201ENST00000362931 109 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 Y_RNA.273-201ENST00000364703 102 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 RNY4P28-201ENST00000365281 93 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 RNU6-47P-201ENST00000383866 107 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 DBIP1-201ENST00000401435 260 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 RN7SKP51-201ENST00000410781 304 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 RNF10P1-201ENST00000418589 369 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AL354766.1-201ENST00000423396 542 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 RPL21P6-201ENST00000479171 504 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 RPS24P16-201ENST00000497294 392 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC091912.1-201ENST00000511351 248 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 NDUFB4P9-201ENST00000511646 388 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 Y_RNA.687-201ENST00000516558 91 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC009643.1-201ENST00000532030 391 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 MRPS18CP4-201ENST00000535821 231 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC006116.3-201ENST00000592968 361 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AL049794.2-201ENST00000616301 365 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AC109583.2-201ENST00000617367 129 ntBASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NKX2-3Q8TAU0 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms