Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AP005435.3-201ENST00000531260 3198 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 RNU6-562P-201ENST00000362731 107 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 RNU6-704P-201ENST00000364162 103 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 RNU6-81P-201ENST00000365608 104 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 RNU6-378P-201ENST00000384324 107 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC013442.1-201ENST00000397347 228 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AL136131.1-201ENST00000406079 803 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AL590632.1-201ENST00000424289 371 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 CYCSP24-201ENST00000445119 316 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 NDUFB1P2-201ENST00000449477 176 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 RPL23AP12-201ENST00000467573 473 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 ENPP7P11-201ENST00000505915 627 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC116562.3-201ENST00000506136 177 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 OR7H2P-201ENST00000513483 306 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 RNA5SP503-201ENST00000517047 117 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC068587.5-201ENST00000528506 175 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC040926.1-201ENST00000530195 238 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 RPL21P12-201ENST00000559810 515 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC103710.2-201ENST00000609912 942 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC011155.2-201ENST00000623202 216 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 CR381572.2-201ENST00000624852 397 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 U6.101-201ENST00000637707 76 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 AC097461.1-201ENST00000568928 2821 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 SDAD1P2-201ENST00000441308 2028 ntBASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD1Q8NHV4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 PABPC1P7-201ENST00000413177 1513 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC027287.1-201ENST00000553115 1453 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC097714.1-201ENST00000511272 1647 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 IGKV7-3-201ENST00000357453 298 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 Y_RNA.19-201ENST00000362462 99 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 RNU6-190P-201ENST00000384154 102 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 MIR450B-201ENST00000401182 78 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 RNA5SP113-201ENST00000410486 84 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 USMG5P1-201ENST00000425964 177 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC096632.1-201ENST00000427395 310 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 MYL8P-204ENST00000431574 518 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC000111.2-201ENST00000448200 210 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AL162388.1-201ENST00000450912 352 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 RBMY2TP-201ENST00000451162 947 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 RPS29P26-201ENST00000477483 171 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AF279873.1-201ENST00000523393 313 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 SULT1C2P1-202ENST00000562418 459 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 MIR5188-201ENST00000583467 113 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC010424.2-201ENST00000607594 443 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 ATP5A1P2-202ENST00000616464 443 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 AC103705.1-201ENST00000619013 241 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 MIR4272-201ENST00000635924 64 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 SAMMSON-226ENST00000642089 1582 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms