Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC017100.2-201ENST00000584628 355 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC004908.2-201ENST00000609090 574 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC100793.4-201ENST00000613683 429 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 AC010872.1-201ENST00000624225 675 ntBASIC1.27□□□□□ -2.21
SPTSSBQ8NFR3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AL390862.1-201ENST00000635467 1469 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC004520.1-201ENST00000608362 1413 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 MIR676-201ENST00000390702 67 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 RNU6ATAC-201ENST00000408749 126 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC069157.1-201ENST00000421749 137 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC004865.1-201ENST00000442276 1003 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC091959.2-201ENST00000477363 321 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC072039.1-201ENST00000477611 581 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC104435.1-201ENST00000483483 166 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 RPL23AP41-201ENST00000484754 458 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC068781.1-201ENST00000488231 618 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 RPL23AP49-201ENST00000492925 468 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 GZMAP1-201ENST00000503054 631 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 NDUFA5P12-201ENST00000503796 343 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 SCARNA17.1-201ENST00000516211 143 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 SCARNA17.2-201ENST00000516334 143 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 SNORA74D-201ENST00000516404 141 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 RNU6-928P-201ENST00000516876 104 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 CKS1BP7-201ENST00000522230 235 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC022616.2-201ENST00000523185 300 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 PSMA2P1-201ENST00000526365 646 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC078814.3-201ENST00000553036 491 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 MIR5571-201ENST00000577998 113 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC090312.2-201ENST00000582687 378 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 MIR3935-201ENST00000583472 104 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AC021749.1-201ENST00000604322 607 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AP002826.1-201ENST00000608835 315 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 SCARNA17.4-201ENST00000614296 143 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 ZYXP1-201ENST00000617638 118 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 MIR7703-201ENST00000620784 77 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 AP003400.5-201ENST00000624827 617 ntBASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SPTSSBQ8NFR3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 RNA5SP456-201ENST00000364002 114 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 RNU1-148P-201ENST00000384472 162 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 RNU6-1035P-201ENST00000384477 107 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 FABP12P1-201ENST00000401911 322 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 RNA5SP338-201ENST00000410495 85 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 RNA5SP21-201ENST00000410917 96 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 RPL7P8-201ENST00000411964 730 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC008280.1-201ENST00000418851 412 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 XKRYP1-201ENST00000423438 492 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 MTATP6P11-201ENST00000428071 670 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 XKRYP2-201ENST00000432915 492 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AL035246.1-201ENST00000433554 1255 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 ARL4AP4-201ENST00000434170 518 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 CACYBPP2-201ENST00000453625 678 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 RPL23AP3-201ENST00000453844 468 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 MTCO1P42-201ENST00000457379 726 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC055855.1-201ENST00000489563 579 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC096571.1-202ENST00000506634 735 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC093281.2-201ENST00000510153 597 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 HMGN1P15-201ENST00000513870 295 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC016550.3-201ENST00000515706 767 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 RNU6-798P-201ENST00000516912 103 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC009812.2-201ENST00000517657 457 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 C1DP5-201ENST00000525775 383 ntBASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTSSBQ8NFR3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms