Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC006463.2-201ENST00000473326 348 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AC092989.1-201ENST00000481235 277 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AC034222.1-201ENST00000494052 532 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 RPL7P47-201ENST00000497299 556 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 PTGES3P3-201ENST00000511479 482 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 RNU6-714P-201ENST00000516963 103 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 RAB9BP1-201ENST00000519581 626 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AP003181.2-201ENST00000528941 181 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 MIR3186-201ENST00000577404 85 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 SNORA59B-202ENST00000578183 701 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 MIR4284-201ENST00000578924 81 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 MIR3939-201ENST00000582614 106 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 RPL23AP92-201ENST00000603609 255 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AC067959.1-201ENST00000604334 379 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AC010680.4-201ENST00000605334 543 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 RNU6-87P-201ENST00000607561 108 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AC092954.2-201ENST00000609103 430 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AC009318.4-201ENST00000620496 486 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AL356321.1-201ENST00000621360 228 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 AC066616.2-201ENST00000559334 1481 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 ZNF33CP-201ENST00000432492 2030 ntBASIC3.65□□□□□ -1.83
CLIP4Q8N3C7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC090229.1-201ENST00000590983 1609 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 GNG5P1-201ENST00000255500 204 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 XIAPP3-201ENST00000312918 795 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AL161781.1-201ENST00000354277 403 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 SNORA70E-201ENST00000384492 135 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 MTCO3P40-201ENST00000392516 676 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 RPL36AP36-201ENST00000418616 301 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 RPL30P16-201ENST00000419341 429 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 RPL31P45-201ENST00000419532 356 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC012065.2-201ENST00000421295 375 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC233728.2-201ENST00000425348 757 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 ATP5HP2-201ENST00000433885 485 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC083863.1-201ENST00000438811 231 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AL645939.1-201ENST00000453429 797 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 HMGB1P15-201ENST00000453854 435 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC013267.1-201ENST00000458227 267 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 RPL31P58-201ENST00000469001 379 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 KCTD9P5-201ENST00000504141 1170 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 PRDX4P1-201ENST00000507189 574 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 SNORA70.14-201ENST00000516205 110 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC053481.3-201ENST00000577881 843 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 MIR548S-201ENST00000581352 82 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC007566.2-201ENST00000603642 413 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC105429.2-201ENST00000610567 517 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 MLECP1-201ENST00000615893 709 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC099669.2-201ENST00000616549 437 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AL008636.1-201ENST00000625038 1018 ntBASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLIP4Q8N3C7 AL359893.1-201ENST00000447628 1580 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 EXOC5P1-201ENST00000510543 1969 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms