Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC093840.1-201ENST00000511599 336 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 RNA5SP179-201ENST00000517284 121 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 MTATP6P15-201ENST00000527233 835 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 AP000857.1-201ENST00000532151 543 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 AL121766.1-201ENST00000547436 487 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 AL121576.1-201ENST00000556055 276 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC006960.3-201ENST00000561845 705 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC023575.1-201ENST00000580510 358 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 MIR544B-201ENST00000582372 78 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 BNIP3P23-201ENST00000599655 511 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 BCRP9-201ENST00000605312 388 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 AL021707.7-201ENST00000607991 416 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC073308.1-201ENST00000623696 305 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 AC007490.1-201ENST00000624321 703 ntBASIC2.58□□□□□ -2
LINC01561Q8N1V8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01561Q8N1V8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01561Q8N1V8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LINC01561Q8N1V8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01561Q8N1V8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01561Q8N1V8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01561Q8N1V8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 RNU6-217P-201ENST00000384164 104 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 MIR19A-201ENST00000384878 82 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 SNORA57.3-201ENST00000411095 141 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 HMGB1P11-201ENST00000413899 637 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 UBE2FP1-201ENST00000416536 447 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 ATG3P1-201ENST00000419507 911 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AL445669.1-201ENST00000426743 755 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC013267.1-201ENST00000458227 267 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 RNU7-23P-201ENST00000459465 62 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC008481.1-201ENST00000463278 396 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AP003730.1-201ENST00000524605 285 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01561Q8N1V8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC034105.3-201ENST00000565294 442 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 RN7SL753P-201ENST00000581238 290 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AP001004.1-201ENST00000582468 324 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AF038458.1-201ENST00000588406 262 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 TPMTP1-201ENST00000592307 737 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 AP000811.1-201ENST00000603803 651 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC013244.1-201ENST00000604279 193 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC091167.4-201ENST00000605079 184 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AL161629.2-201ENST00000615347 275 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 MTND1P37-201ENST00000636562 264 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 OR6C71P-202ENST00000641886 1107 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AP004289.2-201ENST00000444413 1457 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 AC012618.3-205ENST00000637896 1496 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01561Q8N1V8 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
LINC01561Q8N1V8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.57□□□□□ -2
LINC01561Q8N1V8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.56□□□□□ -2
LINC01561Q8N1V8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.56□□□□□ -2
LINC01561Q8N1V8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.56□□□□□ -2
LINC01561Q8N1V8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.56□□□□□ -2
LINC01561Q8N1V8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
LINC01561Q8N1V8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.56□□□□□ -2
LINC01561Q8N1V8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01561Q8N1V8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01561Q8N1V8 AC068538.1-201ENST00000376856 336 ntBASIC2.56□□□□□ -2
LINC01561Q8N1V8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
LINC01561Q8N1V8 RNU6-398P-201ENST00000384143 109 ntBASIC2.56□□□□□ -2
LINC01561Q8N1V8 RNU6-1200P-201ENST00000384162 107 ntBASIC2.56□□□□□ -2
LINC01561Q8N1V8 RPS26P8-201ENST00000393490 348 ntBASIC2.56□□□□□ -2
LINC01561Q8N1V8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms