Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.68□□□□□ -1.5
SIX5Q8N196 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SIX5Q8N196 AC138907.8-201ENST00000623981 2256 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 MAPK10-328ENST00000641553 4009 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIX5Q8N196 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.68□□□□□ -1.5
SIX5Q8N196 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIX5Q8N196 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIX5Q8N196 Y_RNA.39-201ENST00000362620 98 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 Y_RNA.152-201ENST00000363578 100 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 RNU6-26P-201ENST00000383985 107 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 Y_RNA.424-201ENST00000384063 103 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 MIR130A-201ENST00000385274 89 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 GLULP6-201ENST00000399502 913 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 HSPE1P8-201ENST00000406997 288 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.68□□□□□ -1.5
SIX5Q8N196 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.68□□□□□ -1.5
SIX5Q8N196 RPL7L1P1-201ENST00000448259 785 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.68□□□□□ -1.5
SIX5Q8N196 RNU7-138P-201ENST00000459479 64 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 RN7SL738P-201ENST00000470264 297 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 DUTP1-201ENST00000493631 470 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.68□□□□□ -1.5
SIX5Q8N196 AC009901.1-201ENST00000506703 541 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.68□□□□□ -1.5
SIX5Q8N196 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.68□□□□□ -1.5
SIX5Q8N196 AC091516.1-201ENST00000549191 703 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 AC126615.2-201ENST00000553003 515 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.68□□□□□ -1.5
SIX5Q8N196 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.68□□□□□ -1.5
SIX5Q8N196 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.68□□□□□ -1.5
SIX5Q8N196 AC025574.2-201ENST00000615621 514 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 AC138965.3-201ENST00000623875 498 ntBASIC5.68□□□□□ -1.5
SIX5Q8N196 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.68□□□□□ -1.5
SIX5Q8N196 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIX5Q8N196 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.5
SIX5Q8N196 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIX5Q8N196 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIX5Q8N196 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIX5Q8N196 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIX5Q8N196 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIX5Q8N196 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.67□□□□□ -1.5
SIX5Q8N196 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SIX5Q8N196 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.67□□□□□ -1.5
SIX5Q8N196 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIX5Q8N196 FAM91A3P-201ENST00000456826 2544 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIX5Q8N196 RNU6-1249P-201ENST00000363237 111 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 RNU6-450P-201ENST00000364654 107 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 RNU6-784P-201ENST00000384330 106 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 SNORA70E-201ENST00000384492 135 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 Y_RNA.645-201ENST00000391229 102 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 RNU6-712P-201ENST00000410558 100 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 SSXP9-201ENST00000417503 292 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX5Q8N196 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIX5Q8N196 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.67□□□□□ -1.5
SIX5Q8N196 AL645568.3-201ENST00000433683 316 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 AC090774.1-201ENST00000435925 246 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.67□□□□□ -1.5
SIX5Q8N196 AC091180.1-201ENST00000462104 372 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 AC090686.1-201ENST00000481577 749 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX5Q8N196 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX5Q8N196 RNU6-120P-201ENST00000516077 103 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.67□□□□□ -1.5
SIX5Q8N196 AC069307.1-201ENST00000602820 447 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 AC018889.1-201ENST00000605372 397 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 AC002044.1-201ENST00000606707 158 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.67□□□□□ -1.5
SIX5Q8N196 AC074101.1-201ENST00000637861 241 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIX5Q8N196 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIX5Q8N196 SOCS5P3-201ENST00000425115 1576 ntBASIC5.67□□□□□ -1.5
SIX5Q8N196 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIX5Q8N196 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIX5Q8N196 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.66□□□□□ -1.5
SIX5Q8N196 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SIX5Q8N196 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.66□□□□□ -1.5
SIX5Q8N196 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.66□□□□□ -1.5
SIX5Q8N196 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SIX5Q8N196 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SIX5Q8N196 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SIX5Q8N196 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 AL450326.2-201ENST00000421913 1962 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.66□□□□□ -1.5
SIX5Q8N196 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.66□□□□□ -1.5
SIX5Q8N196 SNORA41-201ENST00000384675 132 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 SNORA11-201ENST00000408789 128 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 RNU6-55P-201ENST00000411092 107 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 AC096664.2-201ENST00000411843 406 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 PPP1R11P2-201ENST00000423543 382 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms