Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TRBV26-201ENST00000456572 344 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 S100A11P2-201ENST00000467589 312 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC011352.3-201ENST00000505162 593 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 RNU5A-7P-201ENST00000515979 116 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 RNU6-467P-201ENST00000517027 110 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 MTATP6P2-201ENST00000603319 678 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC120053.1-201ENST00000607706 736 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC135507.2-201ENST00000612443 309 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC068880.4-201ENST00000623082 495 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC093875.1-201ENST00000623688 504 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 AC098679.5-201ENST00000624394 571 ntBASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDKL3Q8IVW4 TAB3P1-202ENST00000452645 1634 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AC026241.1-201ENST00000517873 2142 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 SNORA63.3-201ENST00000362682 132 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 SNORA40.4-201ENST00000390971 128 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AL356057.2-201ENST00000403318 432 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AL096701.2-201ENST00000416920 238 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AC099677.1-201ENST00000420575 175 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AL513175.2-201ENST00000422071 443 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 RPL7P44-201ENST00000424827 742 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AC000041.1-201ENST00000439655 175 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 RPS24P13-201ENST00000442520 397 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 ST13P20-201ENST00000447996 1065 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 SNORA59A-201ENST00000459326 152 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 VPS26AP1-201ENST00000483197 979 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AP001804.3-201ENST00000525146 880 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AC006518.2-201ENST00000542513 940 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 CYCSP39-201ENST00000565821 309 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AC010620.2-201ENST00000600135 313 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 AC006329.2-201ENST00000611491 394 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 BX649567.1-201ENST00000642071 1134 ntBASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
CDKL3Q8IVW4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 NACA3P-201ENST00000359690 648 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 RNU6-619P-201ENST00000365146 108 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 OR1L1-202ENST00000373686 1083 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 RNU2-25P-201ENST00000411041 191 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AL592148.1-201ENST00000413568 445 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AL035410.1-201ENST00000427409 427 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 RPL36AP6-201ENST00000435770 321 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 SEPT14P24-201ENST00000447236 180 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 MTND2P19-201ENST00000449129 1012 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AC096751.1-202ENST00000502691 1067 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 RAC1P5-201ENST00000512182 576 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AC100870.1-201ENST00000522035 505 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 U73023.1-201ENST00000603134 700 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 BX664608.1-201ENST00000610519 487 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 Z82195.2-201ENST00000612348 18351 ntBASIC2.74□□□□□ -1.97
CDKL3Q8IVW4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 RNU1-112P-201ENST00000364401 164 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 MTCO2P31-201ENST00000402702 684 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AL023807.1-201ENST00000407932 359 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 RNU6-712P-201ENST00000410558 100 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms