Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 ATP5JP1-201ENST00000431631 322 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC079781.2-201ENST00000446424 169 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 TPT1P13-201ENST00000449760 499 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 MRPS17P3-201ENST00000465453 385 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC078785.3-201ENST00000476607 425 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 RNU6-1170P-201ENST00000515974 106 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC022861.1-201ENST00000522981 663 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 BNIP3P6-201ENST00000549284 499 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AL356432.3-201ENST00000568952 465 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 MIR4675-201ENST00000577898 77 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC115085.1-201ENST00000588924 229 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 BBIP1P1-201ENST00000602999 279 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 Z84480.1-201ENST00000605131 311 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC243654.2-201ENST00000612843 443 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC140479.6-201ENST00000633535 357 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 MTND5P33-201ENST00000571250 1450 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VRK3Q8IV63 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VRK3Q8IV63 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
VRK3Q8IV63 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VRK3Q8IV63 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AL158163.1-201ENST00000603915 1649 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 RNA5SP175-201ENST00000364275 119 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 RNU6-853P-201ENST00000364306 107 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 SNORA33.2-201ENST00000365413 134 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 SNORA32.2-201ENST00000384049 122 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 RNU6-441P-201ENST00000384545 106 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 MIR649-201ENST00000384843 97 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 MIR1-2-201ENST00000384961 85 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 RPL5P18-201ENST00000406671 891 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 RPL18P10-201ENST00000425606 538 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AL157831.1-201ENST00000426134 473 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 RPL23AP30-201ENST00000432419 501 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 IPO7P1-201ENST00000442031 636 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 DDX3P2-201ENST00000446138 111 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 ABCF2P2-201ENST00000450549 296 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AP1S2P1-201ENST00000457344 379 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 RNU7-63P-201ENST00000459054 62 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC079804.1-201ENST00000461922 436 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 NPM1P41-201ENST00000512920 831 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 Y_RNA.711-201ENST00000516993 102 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 RN7SKP256-201ENST00000517201 314 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 RAB9BP1-201ENST00000519581 626 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC009643.1-201ENST00000532030 391 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 OR5BN1P-201ENST00000532955 829 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC018552.1-201ENST00000562099 811 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC136443.5-201ENST00000603741 370 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC093913.1-201ENST00000614178 329 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VRK3Q8IV63 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms