Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
CCDC71Q8IV32 AC040168.1-201ENST00000623594 991 ntBASIC3.15□□□□□ -1.91
CCDC71Q8IV32 AL356473.1-201ENST00000406203 1408 ntBASIC3.15□□□□□ -1.91
CCDC71Q8IV32 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC71Q8IV32 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.91
CCDC71Q8IV32 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC71Q8IV32 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 SGO1P2-201ENST00000429458 1589 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 OR5H2-201ENST00000355273 945 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 RNU6-263P-201ENST00000363811 107 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 SNORA38.1-201ENST00000364172 131 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 SNORA4.1-201ENST00000364263 144 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 MIR128-1-201ENST00000384921 82 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 SNORD17-201ENST00000390930 237 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AL583834.1-201ENST00000406943 343 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 RNU4-78P-201ENST00000410940 126 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC107081.1-201ENST00000414975 361 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AL356968.1-201ENST00000416622 474 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 PSMA6P3-201ENST00000428242 164 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC005019.1-201ENST00000436455 431 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 MTCYBP34-201ENST00000439552 670 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 HSPE1P28-201ENST00000443139 211 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AL109741.2-201ENST00000455561 343 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 RNU7-136P-201ENST00000458819 69 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 MTCO2P6-201ENST00000463134 685 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC010625.1-201ENST00000511296 403 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC107934.2-201ENST00000518653 310 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC022861.1-201ENST00000522981 663 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 DUXAP5-201ENST00000529668 529 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 EEF1B2P4-201ENST00000551398 348 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC002400.1-201ENST00000569310 726 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC005951.1-201ENST00000576706 485 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC097520.1-201ENST00000624435 385 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC017037.3-201ENST00000625016 472 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 AC091925.2-201ENST00000625059 256 ntBASIC3.14□□□□□ -1.91
CCDC71Q8IV32 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC71Q8IV32 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AL391994.1-201ENST00000254724 282 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 RPL23AP57-201ENST00000332361 466 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 RPL7P26-201ENST00000333817 754 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 RNA5SP295-201ENST00000362655 121 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 SNORD51-201ENST00000384320 80 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 RNU2-15P-201ENST00000410692 191 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 PIGPP2-201ENST00000411569 458 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 MTCO2P5-201ENST00000422621 426 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AL590233.1-201ENST00000430017 456 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AL354941.1-201ENST00000438600 464 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 HMGB3P11-201ENST00000440127 604 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AL606662.1-201ENST00000445763 553 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC005297.2-201ENST00000450430 606 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AP001992.1-205ENST00000462248 379 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 HMGB1P25-201ENST00000468402 607 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 RN7SL807P-201ENST00000470923 297 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 RPS29P2-201ENST00000479278 136 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC093281.2-201ENST00000510153 597 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 GMPSP1-201ENST00000514075 579 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 MTATP6P15-201ENST00000527233 835 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 RPL21P12-201ENST00000559810 515 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC106782.4-201ENST00000568264 210 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms