Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AC097504.1-201ENST00000515103 2415 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 RPL23AP57-201ENST00000332361 466 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 MIR383-201ENST00000362257 73 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 Y_RNA.28-201ENST00000362554 111 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 RN7SKP224-201ENST00000364140 325 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 RNU1-132P-201ENST00000364300 164 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 Y_RNA.301-201ENST00000364990 103 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 RNU4-20P-201ENST00000365601 151 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 MIR23A-201ENST00000385245 73 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 RNU6-1106P-201ENST00000390845 107 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AL078604.1-201ENST00000404609 466 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 RPL23AP38-201ENST00000423801 469 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 CBX3P6-201ENST00000430257 527 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AL356276.2-201ENST00000435919 558 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AC073415.1-201ENST00000449240 153 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AL356010.1-201ENST00000456364 102 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 APOOP2-201ENST00000461561 539 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 RPS4XP10-201ENST00000465034 731 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 Y_RNA.665-201ENST00000516177 98 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 SUMO2P20-201ENST00000520803 283 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AP003122.3-201ENST00000526316 255 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 OR4R1P-201ENST00000529879 463 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 SNRPGP18-201ENST00000553000 214 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 SULT1C2P1-202ENST00000562418 459 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 LARP7P2-201ENST00000575306 125 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 APOOP1-201ENST00000604695 592 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AC113403.1-201ENST00000604910 193 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AP000654.2-201ENST00000605633 586 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AC020634.1-201ENST00000608701 549 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 AC004908.2-201ENST00000609090 574 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 MTND4P1-201ENST00000457501 1466 ntBASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.91□□□□□ -1.62
CNKSR3Q6P9H4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.9□□□□□ -1.62
CNKSR3Q6P9H4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CNKSR3Q6P9H4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CNKSR3Q6P9H4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.9□□□□□ -1.62
CNKSR3Q6P9H4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNKSR3Q6P9H4 SPRR2C-201ENST00000290702 219 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 Y_RNA.339-201ENST00000365325 102 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-1293P-201ENST00000384077 107 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 MIR514A2-201ENST00000385131 88 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 MIR514A3-201ENST00000385132 88 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 MIR548F4-201ENST00000408515 105 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 ERLEC1P1-201ENST00000433806 578 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AL731563.1-201ENST00000442202 214 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 Z95327.1-201ENST00000446082 482 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 RPL23AP43-201ENST00000446445 471 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AL583843.1-201ENST00000456070 346 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 MTCO2P24-201ENST00000515611 426 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 SCARNA24.1-201ENST00000516465 137 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC022790.1-201ENST00000522872 204 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC007938.3-201ENST00000604965 623 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC245389.1-201ENST00000605141 529 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC121334.2-201ENST00000605387 271 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 uc_338.15-201ENST00000615470 191 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 uc_338.13-201ENST00000618243 179 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-156P-201ENST00000621869 107 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC244517.12-201ENST00000623581 663 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AP000542.2-201ENST00000623199 6179 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms