Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC016712.1-201ENST00000431088 378 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 RPL23AP50-201ENST00000434149 455 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 AL359265.2-201ENST00000434367 631 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 RPS29P10-201ENST00000439197 166 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 AC011753.3-201ENST00000443436 406 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 AC022133.1-201ENST00000490961 571 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 AC008526.1-201ENST00000509149 338 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 AL512782.1-201ENST00000603093 364 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 AL355297.3-201ENST00000604082 446 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 AC009229.3-201ENST00000608056 282 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 AC103710.2-201ENST00000609912 942 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 DUSP12P1-201ENST00000612874 516 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF43Q68DV7 AC107021.2-201ENST00000567714 2095 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF43Q68DV7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF43Q68DV7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF43Q68DV7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF43Q68DV7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC008079.2-201ENST00000623543 20396 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF43Q68DV7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC010615.1-201ENST00000594254 1764 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 RNU6-28P-201ENST00000362378 107 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 Y_RNA.60-201ENST00000362831 98 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 RNU1-115P-201ENST00000365329 160 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 Y_RNA.428-201ENST00000384078 102 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 RNU6-921P-201ENST00000384361 107 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 EIF4E2P1-201ENST00000393781 255 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 PGBD4P6-201ENST00000421501 610 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 COX6CP15-201ENST00000426313 211 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 DNAJC19P7-201ENST00000428811 344 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 RPL23AP89-201ENST00000439324 255 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 OSTCP8-201ENST00000445117 448 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 SNORD116.3-201ENST00000517176 78 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC131281.1-201ENST00000522984 164 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF43Q68DV7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC233702.9-201ENST00000581528 203 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 MIR4270-201ENST00000581799 70 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC060771.1-201ENST00000582031 164 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC110743.1-201ENST00000584870 478 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC092447.9-201ENST00000603395 144 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 HSPE1P14-201ENST00000605812 302 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 AL138726.1-201ENST00000614873 333 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 AC244100.1-202ENST00000621554 382 ntBASIC5.3□□□□□ -1.56
RNF43Q68DV7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF43Q68DV7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RNF43Q68DV7 MTND5P7-201ENST00000413558 1798 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF43Q68DV7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 RNU6-82P-201ENST00000363970 107 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 Y_RNA.210-201ENST00000364161 110 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF43Q68DV7 SNORA51.6-201ENST00000384151 125 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 RNU6-1207P-201ENST00000384343 107 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 RN7SKP114-201ENST00000410327 279 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 RNU6-1050P-201ENST00000410388 107 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 RPL36AP10-201ENST00000421785 322 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 RHOT1P3-201ENST00000436571 331 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 RPL35AP21-201ENST00000437667 333 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 RPL21P2-201ENST00000440049 481 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 AL031584.1-201ENST00000447169 754 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 HMGB1P4-201ENST00000455362 567 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 SNORD127-201ENST00000458892 86 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms