Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 GAPDHP27-201ENST00000447427 1020 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AL162388.1-201ENST00000450912 352 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 RPL37P6-202ENST00000464216 403 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 DYNLL1P5-201ENST00000467158 270 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 RPS27AP1-201ENST00000475545 471 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 RN7SL432P-201ENST00000484057 298 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AC004453.1-201ENST00000487895 408 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 RNU6-685P-201ENST00000517088 95 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AP003122.3-201ENST00000526316 255 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AL117187.1-201ENST00000555482 181 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AC106782.4-201ENST00000568264 210 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AL031176.1-201ENST00000604554 466 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AP005432.2-201ENST00000608162 586 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AC087588.2-201ENST00000617667 426 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AC091905.4-201ENST00000623432 202 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AL596275.2-204ENST00000641628 552 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AL596275.2-206ENST00000641957 626 ntBASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DQA1Q5Y7H0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1Q5Y7H0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1Q5Y7H0 AC010300.1-201ENST00000600671 5134 ntBASIC4.65□□□□□ -1.66
HLA-DQA1Q5Y7H0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1Q5Y7H0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1Q5Y7H0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.65□□□□□ -1.66
HLA-DQA1Q5Y7H0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.65□□□□□ -1.66
HLA-DQA1Q5Y7H0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.65□□□□□ -1.66
HLA-DQA1Q5Y7H0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNU6-146P-201ENST00000384602 108 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 SNORD70.1-201ENST00000391007 85 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AL078599.1-201ENST00000402075 293 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 RPL12P34-201ENST00000424532 479 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 BX323845.1-201ENST00000432417 179 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 RPL21P112-201ENST00000434403 463 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AL035666.1-201ENST00000446195 348 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 FABP5P13-201ENST00000452144 328 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC234775.1-201ENST00000454247 670 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC245028.2-201ENST00000458673 253 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 snoU109.4-201ENST00000458953 143 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC140172.1-201ENST00000502928 141 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC079140.5-201ENST00000507882 310 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 NDUFB5P1-201ENST00000508134 564 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 RNU6-123P-201ENST00000516163 102 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC027308.1-201ENST00000517993 110 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC100870.1-201ENST00000522035 505 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC040958.1-201ENST00000561102 201 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 OR1F2P-201ENST00000570470 933 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 TVP23CP2-201ENST00000571473 623 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 MIR4680-201ENST00000580906 66 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AL031320.1-201ENST00000604177 357 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC083806.3-201ENST00000614016 455 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 TUG1_2.1-201ENST00000614234 87 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 SNHG22-203ENST00000617833 660 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC098657.3-201ENST00000620434 263 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AL669831.3-213ENST00000636676 183 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AC000374.1-201ENST00000434698 1745 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 MAPK10-328ENST00000641553 4009 ntBASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
HLA-DQA1Q5Y7H0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1Q5Y7H0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1Q5Y7H0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1Q5Y7H0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1Q5Y7H0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1Q5Y7H0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms