Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC106785.1-201ENST00000565935 262 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AF038458.1-201ENST00000588406 262 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC012507.3-201ENST00000603556 477 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AL359880.1-201ENST00000621879 266 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AL136313.1-201ENST00000624804 202 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 RNA5SP196-201ENST00000625967 102 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC009812.4-201ENST00000569134 1805 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 RNU6-511P-201ENST00000363496 107 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 RNU1-132P-201ENST00000364300 164 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 RNU6-282P-201ENST00000365357 103 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 RNU6-456P-201ENST00000384493 107 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 TOMM22P1-201ENST00000418578 312 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 MTATP6P4-201ENST00000427725 675 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 DHFRP3-201ENST00000455595 559 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC012158.1-204ENST00000483430 465 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 PARP4P3-201ENST00000510265 317 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 PPBPP1-201ENST00000510807 373 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 ERHP1-201ENST00000523006 310 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 FAM60DP-201ENST00000524174 632 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 SUB1P2-201ENST00000556401 297 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC091178.1-203ENST00000584586 279 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC008966.2-201ENST00000606157 453 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC067931.1-201ENST00000624190 671 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC009161.2-201ENST00000624626 138 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AL160394.1-201ENST00000624765 724 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC006065.6-201ENST00000625201 545 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 CPHL1P-201ENST00000461341 3407 ntBASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC144BQ3MJ40 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 CR848007.1-201ENST00000442354 1699 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 OR5J1P-201ENST00000313544 939 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 Y_RNA.481-201ENST00000384373 102 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 MIR134-201ENST00000385258 73 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 RPL21P66-201ENST00000426566 466 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 RPL23AP31-201ENST00000456160 467 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC079804.1-201ENST00000461922 436 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC010469.1-201ENST00000463864 576 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC090572.1-201ENST00000519251 160 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC069240.1-201ENST00000548774 375 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC093012.1-202ENST00000549403 582 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 OR4H12P-201ENST00000556269 907 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 MIR4293-201ENST00000584305 78 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AC098848.2-201ENST00000588023 330 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AL606834.2-201ENST00000602954 668 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC144BQ3MJ40 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms