Protein–RNA interactions for Protein: Q15116

PDCD1, Programmed cell death protein 1, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1Q15116 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PDCD1Q15116 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.24□□□□□ -1.73
PDCD1Q15116 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.24□□□□□ -1.73
PDCD1Q15116 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.24□□□□□ -1.73
PDCD1Q15116 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 RN7SKP113-201ENST00000363891 295 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 RNU4-20P-201ENST00000365601 151 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 RNU6-190P-201ENST00000384154 102 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 RNU1-106P-201ENST00000384382 164 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 HSPD1P16-201ENST00000402302 394 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 SNORA77-201ENST00000408716 125 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 MIR1290-201ENST00000408735 78 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 RN7SKP216-201ENST00000411050 312 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 GJA6P-201ENST00000415117 1042 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.24□□□□□ -1.73
PDCD1Q15116 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.24□□□□□ -1.73
PDCD1Q15116 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AC018630.2-202ENST00000422992 927 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AL590762.4-201ENST00000425885 253 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AL450023.3-201ENST00000440592 271 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AC091685.2-201ENST00000454924 864 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 RPL23AP31-201ENST00000456160 467 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AC078817.1-201ENST00000492623 435 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 MRPS33P2-201ENST00000507850 322 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AC007016.1-201ENST00000512110 244 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 SNORA31.3-201ENST00000516029 96 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 RN7SKP147-201ENST00000517154 244 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 IGKV2D-23-201ENST00000518179 286 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AC012339.2-201ENST00000523996 453 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AL121576.1-201ENST00000556055 276 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 MIR4472-2-201ENST00000582069 67 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.24□□□□□ -1.73
PDCD1Q15116 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.24□□□□□ -1.73
PDCD1Q15116 MIR6748-201ENST00000610433 71 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AC100827.5-201ENST00000615883 426 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AC009248.2-201ENST00000619826 254 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 AL359697.1-201ENST00000624879 587 ntBASIC4.24□□□□□ -1.73
PDCD1Q15116 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
PDCD1Q15116 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.24□□□□□ -1.73
PDCD1Q15116 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.24□□□□□ -1.73
PDCD1Q15116 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
PDCD1Q15116 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDCD1Q15116 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.23□□□□□ -1.73
PDCD1Q15116 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
PDCD1Q15116 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.23□□□□□ -1.73
PDCD1Q15116 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.23□□□□□ -1.73
PDCD1Q15116 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
PDCD1Q15116 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDCD1Q15116 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.23□□□□□ -1.73
PDCD1Q15116 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDCD1Q15116 RNU6-550P-201ENST00000391057 101 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 RPS4XP9-201ENST00000405151 780 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 RN7SKP140-201ENST00000411196 284 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AC007738.1-201ENST00000413892 348 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 PDSS1P1-201ENST00000422953 1114 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.23□□□□□ -1.73
PDCD1Q15116 FAR2P4-202ENST00000425399 584 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 AC079780.1-201ENST00000428259 207 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.23□□□□□ -1.73
PDCD1Q15116 IFNA20P-201ENST00000436840 528 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.23□□□□□ -1.73
PDCD1Q15116 H2AFZP6-201ENST00000444403 394 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AC012512.1-201ENST00000446594 718 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 KNOP1P3-201ENST00000446933 426 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 BTF3P6-201ENST00000448054 499 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 RPL35AP28-201ENST00000459730 331 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 RPL5P30-201ENST00000465511 891 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 RPL7P19-201ENST00000469948 618 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AC092451.1-201ENST00000480211 153 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 FGF7P4-201ENST00000509595 295 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AC023141.12-201ENST00000512399 199 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AC004980.4-201ENST00000513375 203 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 274.8 ms