Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LRRC6P1-201ENST00000532188 885 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC138915.2-201ENST00000569776 97 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC005000.2-201ENST00000605468 310 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC107871.2-201ENST00000612894 502 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC010975.3-201ENST00000618727 978 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC022306.3-201ENST00000619930 550 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC009318.4-201ENST00000620496 486 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC006111.3-201ENST00000622137 383 ntBASIC2.73□□□□□ -1.97
HMGCS1Q01581 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCS1Q01581 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS1Q01581 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS1Q01581 AC000403.1-201ENST00000613696 3585 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCS1Q01581 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 snoZ40.1-201ENST00000364540 72 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 AL161449.1-201ENST00000414531 1199 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCS1Q01581 MTATP6P4-201ENST00000427725 675 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 GAPDHP27-201ENST00000447427 1020 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC004022.1-201ENST00000447766 1066 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 OR4G11P-201ENST00000492842 939 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC093767.1-201ENST00000504523 156 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC113420.1-201ENST00000507903 571 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 AP000857.1-201ENST00000532151 543 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC022080.3-201ENST00000544433 482 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC107016.2-201ENST00000547968 190 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 MTCYBP27-201ENST00000555160 670 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 MTND3P13-201ENST00000574391 343 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 MIR4506-201ENST00000584693 77 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGCS1Q01581 AP002907.1-201ENST00000606361 1430 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AC097504.2-201ENST00000608088 454 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AP001521.1-201ENST00000609150 300 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 AL391834.2-201ENST00000609982 546 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 CYCSP41-201ENST00000616920 296 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 MTND2P41-201ENST00000637599 773 ntBASIC2.72□□□□□ -1.97
HMGCS1Q01581 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.71□□□□□ -1.97
HMGCS1Q01581 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 OR5H2-201ENST00000355273 945 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 RNU4-51P-201ENST00000364206 140 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 Y_RNA.408-201ENST00000383987 102 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 Y_RNA.472-201ENST00000384322 102 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 RNU2-42P-201ENST00000410697 113 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 RPL7P44-201ENST00000424827 742 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 MTCO1P53-201ENST00000441633 699 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC011825.1-201ENST00000484967 388 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC027309.2-201ENST00000520566 192 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 HPRT1P3-201ENST00000539521 576 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 MIR3912-201ENST00000577566 105 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC006504.3-201ENST00000586818 523 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AL139022.2-201ENST00000606934 443 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC005046.1-201ENST00000608515 625 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC006329.2-201ENST00000611491 394 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 PART1_2.1-201ENST00000612397 250 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC002076.2-201ENST00000617362 122 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS1Q01581 AL360181.4-201ENST00000621752 134 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC040168.1-201ENST00000623594 991 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC090617.7-201ENST00000623952 126 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC010608.3-201ENST00000625048 527 ntBASIC2.71□□□□□ -1.98
HMGCS1Q01581 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms