Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 RNU6-730P-201ENST00000383954 104 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 SNORA41-201ENST00000384675 132 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HOXC5Q00444 AC092447.6-201ENST00000414578 210 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 RPL21P32-201ENST00000419877 477 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 NUP35P1-201ENST00000422734 947 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXC5Q00444 MTCYBP34-201ENST00000439552 670 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXC5Q00444 AC104389.3-201ENST00000445629 235 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 AC004022.1-201ENST00000447766 1066 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXC5Q00444 RPL37P25-201ENST00000507308 276 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 RAC1P5-201ENST00000512182 576 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXC5Q00444 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXC5Q00444 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXC5Q00444 OR5BN1P-201ENST00000532955 829 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 AC074051.3-201ENST00000570238 358 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXC5Q00444 AL355812.1-201ENST00000603215 216 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 NUTF2P8-201ENST00000604593 363 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 AL137843.1-201ENST00000605078 385 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 AC112503.2-201ENST00000609005 552 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 MIR6817-201ENST00000615588 66 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 AC140725.3-201ENST00000616193 880 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 MIR6076-201ENST00000617521 113 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXC5Q00444 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HOXC5Q00444 AC025263.3-201ENST00000622965 1396 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
HOXC5Q00444 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HOXC5Q00444 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC5Q00444 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC5Q00444 MTND5P11-201ENST00000511037 1812 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 RPL21P132-201ENST00000331267 462 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 RNA5SP68-201ENST00000363885 119 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 SNORD82-201ENST00000365530 70 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC5Q00444 MIR525-201ENST00000384978 85 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC5Q00444 RNA5SP184-201ENST00000411071 108 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC5Q00444 AC012497.1-201ENST00000429392 575 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 MTND4LP7-201ENST00000431728 294 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
HOXC5Q00444 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC5Q00444 RN7SL432P-201ENST00000484057 298 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AC026436.1-201ENST00000510537 270 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC5Q00444 AC112673.1-201ENST00000513168 575 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 RNA5SP82-201ENST00000516707 92 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.2□□□□□ -2.06
HOXC5Q00444 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC5Q00444 IGJP1-201ENST00000522682 475 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 OR4P1P-201ENST00000530808 1136 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC5Q00444 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC5Q00444 AC027176.1-201ENST00000560204 514 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC5Q00444 VN1R88P-201ENST00000596787 292 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AL020997.3-201ENST00000602843 359 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AC096586.1-201ENST00000610267 561 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AC106028.5-201ENST00000610332 395 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 MIR1264-201ENST00000616374 69 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AL163051.2-201ENST00000618976 735 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 VN1R7P-201ENST00000619242 903 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC5Q00444 AL162233.1-201ENST00000620014 944 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 U4.3-201ENST00000621047 82 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 AP003122.6-201ENST00000623831 495 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.2□□□□□ -2.06
HOXC5Q00444 AC130650.2-201ENST00000618736 2403 ntBASIC2.2□□□□□ -2.06
HOXC5Q00444 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC5Q00444 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC5Q00444 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC5Q00444 RNU6-77P-201ENST00000410554 91 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC5Q00444 WARS2P1-201ENST00000429678 537 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 PTP4A1P3-201ENST00000433661 420 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 AL590664.1-201ENST00000448065 339 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 OR51B8P-201ENST00000449892 769 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 HMGN3P1-201ENST00000453847 193 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 RPS20P24-201ENST00000457473 361 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 RPS4XP6-201ENST00000477670 797 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 GTF2IP9-201ENST00000502460 301 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC5Q00444 AC009901.1-201ENST00000506703 541 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 AC103833.1-201ENST00000517442 172 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 OR8K4P-201ENST00000534608 872 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
HOXC5Q00444 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC5Q00444 MIR5194-201ENST00000582634 120 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 AC007621.1-201ENST00000604544 437 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC5Q00444 AC097714.1-201ENST00000511272 1647 ntBASIC2.19□□□□□ -2.06
HOXC5Q00444 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HOXC5Q00444 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
HOXC5Q00444 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXC5Q00444 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms