Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.67□□□□□ -1.98
TPM4P67936 AL035413.2-201ENST00000604801 525 ntBASIC2.67□□□□□ -1.98
TPM4P67936 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
TPM4P67936 MIR6895-201ENST00000613497 78 ntBASIC2.67□□□□□ -1.98
TPM4P67936 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.67□□□□□ -1.98
TPM4P67936 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.67□□□□□ -1.98
TPM4P67936 AL590396.2-201ENST00000636511 1041 ntBASIC2.67□□□□□ -1.98
TPM4P67936 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.67□□□□□ -1.98
TPM4P67936 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
TPM4P67936 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.66□□□□□ -1.98
TPM4P67936 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TPM4P67936 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TPM4P67936 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
TPM4P67936 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.66□□□□□ -1.98
TPM4P67936 RNU6-252P-201ENST00000363232 107 ntBASIC2.66□□□□□ -1.98
TPM4P67936 TAS2R15P-201ENST00000390674 928 ntBASIC2.66□□□□□ -1.98
TPM4P67936 RPS4XP7-201ENST00000406274 780 ntBASIC2.66□□□□□ -1.98
TPM4P67936 AC009237.2-201ENST00000421358 284 ntBASIC2.66□□□□□ -1.98
TPM4P67936 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.66□□□□□ -1.98
TPM4P67936 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.66□□□□□ -1.98
TPM4P67936 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.66□□□□□ -1.98
TPM4P67936 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.66□□□□□ -1.98
TPM4P67936 XKRY2-201ENST00000442362 1093 ntBASIC2.66□□□□□ -1.98
TPM4P67936 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.66□□□□□ -1.98
TPM4P67936 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.66□□□□□ -1.98
TPM4P67936 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.66□□□□□ -1.98
TPM4P67936 XKRY-201ENST00000510392 1100 ntBASIC2.66□□□□□ -1.98
TPM4P67936 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.66□□□□□ -1.98
TPM4P67936 IGLV3-17-201ENST00000519099 244 ntBASIC2.66□□□□□ -1.98
TPM4P67936 AC079089.3-201ENST00000603094 673 ntBASIC2.66□□□□□ -1.98
TPM4P67936 AL136363.1-201ENST00000605349 337 ntBASIC2.66□□□□□ -1.98
TPM4P67936 AL161629.2-201ENST00000615347 275 ntBASIC2.66□□□□□ -1.98
TPM4P67936 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.66□□□□□ -1.98
TPM4P67936 AP006248.3-201ENST00000623580 594 ntBASIC2.66□□□□□ -1.98
TPM4P67936 AC098679.5-201ENST00000624394 571 ntBASIC2.66□□□□□ -1.98
TPM4P67936 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
TPM4P67936 PABPC1P9-201ENST00000426076 1612 ntBASIC2.65□□□□□ -1.98
TPM4P67936 AL139276.1-201ENST00000311910 1001 ntBASIC2.65□□□□□ -1.99
TPM4P67936 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
TPM4P67936 U3.29-201ENST00000391296 212 ntBASIC2.65□□□□□ -1.99
TPM4P67936 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TPM4P67936 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.65□□□□□ -1.99
TPM4P67936 MTND4LP10-201ENST00000435146 291 ntBASIC2.65□□□□□ -1.99
TPM4P67936 AP000936.2-201ENST00000447151 681 ntBASIC2.65□□□□□ -1.99
TPM4P67936 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.65□□□□□ -1.99
TPM4P67936 AL589880.1-201ENST00000448271 287 ntBASIC2.65□□□□□ -1.99
TPM4P67936 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.65□□□□□ -1.99
TPM4P67936 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.65□□□□□ -1.99
TPM4P67936 TRBV26-201ENST00000456572 344 ntBASIC2.65□□□□□ -1.99
TPM4P67936 PABPC1P3-201ENST00000469174 459 ntBASIC2.65□□□□□ -1.99
TPM4P67936 LINC00888-204ENST00000487386 421 ntBASIC2.65□□□□□ -1.99
TPM4P67936 TTC39CP1-201ENST00000512513 755 ntBASIC2.65□□□□□ -1.99
TPM4P67936 AC034159.1-201ENST00000513885 583 ntBASIC2.65□□□□□ -1.99
TPM4P67936 RNU6-1095P-201ENST00000516148 108 ntBASIC2.65□□□□□ -1.99
TPM4P67936 COX6CP8-201ENST00000522620 226 ntBASIC2.65□□□□□ -1.99
TPM4P67936 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.65□□□□□ -1.99
TPM4P67936 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TPM4P67936 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.65□□□□□ -1.99
TPM4P67936 EEF1B2P4-201ENST00000551398 348 ntBASIC2.65□□□□□ -1.99
TPM4P67936 AC010546.1-201ENST00000569391 485 ntBASIC2.65□□□□□ -1.99
TPM4P67936 AC011260.1-201ENST00000578420 472 ntBASIC2.65□□□□□ -1.99
TPM4P67936 ELOCP29-201ENST00000588193 334 ntBASIC2.65□□□□□ -1.99
TPM4P67936 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
TPM4P67936 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.65□□□□□ -1.99
TPM4P67936 AC090617.9-201ENST00000623751 147 ntBASIC2.65□□□□□ -1.99
TPM4P67936 MTCO1P18-201ENST00000455518 1419 ntBASIC2.65□□□□□ -1.99
TPM4P67936 AC093536.2-201ENST00000565257 1406 ntBASIC2.65□□□□□ -1.99
TPM4P67936 ZNF720P1-201ENST00000562403 1939 ntBASIC2.64□□□□□ -1.99
TPM4P67936 AC025263.3-201ENST00000622965 1396 ntBASIC2.64□□□□□ -1.99
TPM4P67936 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TPM4P67936 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
TPM4P67936 RNU6-198P-201ENST00000384258 104 ntBASIC2.64□□□□□ -1.99
TPM4P67936 RNU6-193P-201ENST00000410977 107 ntBASIC2.64□□□□□ -1.99
TPM4P67936 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.64□□□□□ -1.99
TPM4P67936 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.64□□□□□ -1.99
TPM4P67936 AC233981.1-201ENST00000423224 461 ntBASIC2.64□□□□□ -1.99
TPM4P67936 AC234781.2-201ENST00000426370 994 ntBASIC2.64□□□□□ -1.99
TPM4P67936 AL365496.1-201ENST00000426885 215 ntBASIC2.64□□□□□ -1.99
TPM4P67936 WARS2P1-201ENST00000429678 537 ntBASIC2.64□□□□□ -1.99
TPM4P67936 ARL5AP4-201ENST00000430731 512 ntBASIC2.64□□□□□ -1.99
TPM4P67936 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.64□□□□□ -1.99
TPM4P67936 snoU109.4-201ENST00000458953 143 ntBASIC2.64□□□□□ -1.99
TPM4P67936 SNORD109B-201ENST00000458961 67 ntBASIC2.64□□□□□ -1.99
TPM4P67936 SNORD109A-201ENST00000459128 67 ntBASIC2.64□□□□□ -1.99
TPM4P67936 S100A11P2-201ENST00000467589 312 ntBASIC2.64□□□□□ -1.99
TPM4P67936 RPS27P26-201ENST00000494583 239 ntBASIC2.64□□□□□ -1.99
TPM4P67936 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.64□□□□□ -1.99
TPM4P67936 CAB39P1-201ENST00000502277 460 ntBASIC2.64□□□□□ -1.99
TPM4P67936 AC025768.1-201ENST00000510057 267 ntBASIC2.64□□□□□ -1.99
TPM4P67936 OR4P1P-201ENST00000530808 1136 ntBASIC2.64□□□□□ -1.99
TPM4P67936 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.64□□□□□ -1.99
TPM4P67936 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.64□□□□□ -1.99
TPM4P67936 MIR4429-201ENST00000580105 73 ntBASIC2.64□□□□□ -1.99
TPM4P67936 VN1R88P-201ENST00000596787 292 ntBASIC2.64□□□□□ -1.99
TPM4P67936 AC012443.1-201ENST00000605605 231 ntBASIC2.64□□□□□ -1.99
TPM4P67936 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
TPM4P67936 ZNF663P-202ENST00000641770 1131 ntBASIC2.64□□□□□ -1.99
TPM4P67936 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM4P67936 MORF4L1P6-201ENST00000418771 268 ntBASIC2.63□□□□□ -1.99
TPM4P67936 AC009414.1-201ENST00000427200 443 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms