Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC006026.1-201ENST00000444025 1803 ntBASIC1.08□□□□□ -2.24
RPL39P62891 AC107021.2-201ENST00000567714 2095 ntBASIC1.08□□□□□ -2.24
RPL39P62891 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
RPL39P62891 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.07□□□□□ -2.24
RPL39P62891 AP000648.3-201ENST00000623539 4507 ntBASIC1.07□□□□□ -2.24
RPL39P62891 ELF2P3-201ENST00000445099 1506 ntBASIC1.07□□□□□ -2.24
RPL39P62891 U8.3-201ENST00000363321 132 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.07□□□□□ -2.24
RPL39P62891 RPS3AP9-201ENST00000417027 792 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.07□□□□□ -2.24
RPL39P62891 AL137014.1-201ENST00000420490 1226 ntBASIC1.07□□□□□ -2.24
RPL39P62891 BX510359.4-201ENST00000423750 193 ntBASIC1.07□□□□□ -2.24
RPL39P62891 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
RPL39P62891 SDCBPP1-201ENST00000440192 890 ntBASIC1.07□□□□□ -2.24
RPL39P62891 VN1R96P-201ENST00000446052 858 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AL035551.1-201ENST00000446931 348 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.07□□□□□ -2.24
RPL39P62891 RPS29P12-201ENST00000460178 152 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AC104564.1-201ENST00000493028 407 ntBASIC1.07□□□□□ -2.24
RPL39P62891 DSTNP2-201ENST00000504533 515 ntBASIC1.07□□□□□ -2.24
RPL39P62891 RN7SKP234-201ENST00000517173 224 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.07□□□□□ -2.24
RPL39P62891 IGKV2-36-201ENST00000519999 223 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AC022880.1-201ENST00000534017 973 ntBASIC1.07□□□□□ -2.24
RPL39P62891 CBX3P4-201ENST00000538909 354 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.07□□□□□ -2.24
RPL39P62891 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RPL39P62891 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.07□□□□□ -2.24
RPL39P62891 AL096840.1-201ENST00000603287 93 ntBASIC1.07□□□□□ -2.24
RPL39P62891 BX248123.2-201ENST00000606318 124 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AL390240.1-201ENST00000612950 384 ntBASIC1.07□□□□□ -2.24
RPL39P62891 AC012640.5-201ENST00000623897 319 ntBASIC1.07□□□□□ -2.24
RPL39P62891 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.07□□□□□ -2.24
RPL39P62891 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RPL39P62891 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
RPL39P62891 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RPL39P62891 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RPL39P62891 RNU1-62P-201ENST00000362599 164 ntBASIC1.06□□□□□ -2.24
RPL39P62891 RNU1-42P-201ENST00000364033 160 ntBASIC1.06□□□□□ -2.24
RPL39P62891 SNORA11-201ENST00000408789 128 ntBASIC1.06□□□□□ -2.24
RPL39P62891 AC092745.2-202ENST00000411880 369 ntBASIC1.06□□□□□ -2.24
RPL39P62891 PRELID3BP11-201ENST00000414230 479 ntBASIC1.06□□□□□ -2.24
RPL39P62891 Z93242.1-201ENST00000427102 353 ntBASIC1.06□□□□□ -2.24
RPL39P62891 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.06□□□□□ -2.24
RPL39P62891 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL39P62891 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL39P62891 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.06□□□□□ -2.24
RPL39P62891 RPL17P49-201ENST00000443728 411 ntBASIC1.06□□□□□ -2.24
RPL39P62891 RPL7P36-201ENST00000444633 681 ntBASIC1.06□□□□□ -2.24
RPL39P62891 SSXP1-201ENST00000453640 473 ntBASIC1.06□□□□□ -2.24
RPL39P62891 RNA5SP233-201ENST00000459153 113 ntBASIC1.06□□□□□ -2.24
RPL39P62891 AC011352.3-201ENST00000505162 593 ntBASIC1.06□□□□□ -2.24
RPL39P62891 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.06□□□□□ -2.24
RPL39P62891 AC017037.2-201ENST00000513850 890 ntBASIC1.06□□□□□ -2.24
RPL39P62891 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL39P62891 RNU6-250P-201ENST00000516958 103 ntBASIC1.06□□□□□ -2.24
RPL39P62891 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL39P62891 AC027309.2-201ENST00000520566 192 ntBASIC1.06□□□□□ -2.24
RPL39P62891 EEF1A1P37-201ENST00000522748 715 ntBASIC1.06□□□□□ -2.24
RPL39P62891 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL39P62891 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL39P62891 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL39P62891 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.06□□□□□ -2.24
RPL39P62891 HMGN2P28-201ENST00000606102 262 ntBASIC1.06□□□□□ -2.24
RPL39P62891 MIR502-201ENST00000606349 86 ntBASIC1.06□□□□□ -2.24
RPL39P62891 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL39P62891 HPVC1-201ENST00000629899 1198 ntBASIC1.06□□□□□ -2.24
RPL39P62891 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.05□□□□□ -2.24
RPL39P62891 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
RPL39P62891 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RPL39P62891 RNA5SP27-201ENST00000363839 119 ntBASIC1.05□□□□□ -2.24
RPL39P62891 OR1L1-202ENST00000373686 1083 ntBASIC1.05□□□□□ -2.24
RPL39P62891 Y_RNA.510-201ENST00000384511 114 ntBASIC1.05□□□□□ -2.24
RPL39P62891 RNA5SP508-201ENST00000411327 119 ntBASIC1.05□□□□□ -2.24
RPL39P62891 AL513477.1-202ENST00000417061 214 ntBASIC1.05□□□□□ -2.24
RPL39P62891 AC074117.2-201ENST00000417130 397 ntBASIC1.05□□□□□ -2.24
RPL39P62891 RPS3AP44-201ENST00000425466 790 ntBASIC1.05□□□□□ -2.24
RPL39P62891 AL445669.1-201ENST00000426743 755 ntBASIC1.05□□□□□ -2.24
RPL39P62891 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.05□□□□□ -2.24
RPL39P62891 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.05□□□□□ -2.24
RPL39P62891 RPL35AP22-201ENST00000436855 335 ntBASIC1.05□□□□□ -2.24
RPL39P62891 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.05□□□□□ -2.24
RPL39P62891 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.05□□□□□ -2.24
RPL39P62891 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.05□□□□□ -2.24
RPL39P62891 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.05□□□□□ -2.24
RPL39P62891 MTND3P24-201ENST00000506306 329 ntBASIC1.05□□□□□ -2.24
RPL39P62891 AC002456.2-201ENST00000509356 380 ntBASIC1.05□□□□□ -2.24
RPL39P62891 RNA5SP61-201ENST00000516453 100 ntBASIC1.05□□□□□ -2.24
RPL39P62891 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.05□□□□□ -2.24
RPL39P62891 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.05□□□□□ -2.24
RPL39P62891 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.05□□□□□ -2.24
RPL39P62891 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.05□□□□□ -2.24
RPL39P62891 MIR3690-201ENST00000580266 75 ntBASIC1.05□□□□□ -2.24
RPL39P62891 AC011471.1-201ENST00000585766 187 ntBASIC1.05□□□□□ -2.24
RPL39P62891 MTCO3P22-201ENST00000603219 784 ntBASIC1.05□□□□□ -2.24
RPL39P62891 AP003122.6-201ENST00000623831 495 ntBASIC1.05□□□□□ -2.24
RPL39P62891 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.05□□□□□ -2.24
RPL39P62891 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RPL39P62891 AC092881.1-201ENST00000638218 2733 ntBASIC1.05□□□□□ -2.24
RPL39P62891 CDC27P3-201ENST00000635418 1910 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms