Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AL136363.1-201ENST00000605349 337 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AL121757.2-201ENST00000611223 313 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AC099669.2-201ENST00000616549 437 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AC079597.1-201ENST00000624306 508 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AC009161.2-201ENST00000624626 138 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HERVK_113P62684 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HERVK_113P62684 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HERVK_113P62684 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HERVK_113P62684 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HERVK_113P62684 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HERVK_113P62684 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HERVK_113P62684 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HERVK_113P62684 Y_RNA.234-201ENST00000364409 97 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 Y_RNA.356-201ENST00000365475 113 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HERVK_113P62684 RNU1-39P-201ENST00000383897 165 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 RNU6-1011P-201ENST00000384668 107 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 MT-TD-201ENST00000387419 68 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 PTMAP2-201ENST00000397627 327 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 RNU2-9P-201ENST00000410194 145 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.87□□□□□ -1.63
HERVK_113P62684 AC006946.1-201ENST00000429106 328 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 AC007389.2-201ENST00000434630 306 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 SEPT14P3-201ENST00000439401 183 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.87□□□□□ -1.63
HERVK_113P62684 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.87□□□□□ -1.63
HERVK_113P62684 CALM1P1-201ENST00000442082 433 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.87□□□□□ -1.63
HERVK_113P62684 AL732372.2-207ENST00000445840 183 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.87□□□□□ -1.63
HERVK_113P62684 AL358232.1-201ENST00000448030 501 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 SEPT14P2-201ENST00000453405 183 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 RAD23BP3-201ENST00000454157 1152 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 snoU13.22-201ENST00000459428 104 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 AP001992.1-205ENST00000462248 379 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 AF213884.1-201ENST00000488102 463 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.87□□□□□ -1.63
HERVK_113P62684 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.87□□□□□ -1.63
HERVK_113P62684 SEPT14P4-201ENST00000513445 186 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 RNU6-1220P-201ENST00000517126 108 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 FO082796.1-201ENST00000523795 183 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 RPL23AP97-201ENST00000568955 471 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.87□□□□□ -1.63
HERVK_113P62684 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HERVK_113P62684 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HERVK_113P62684 Z95327.2-201ENST00000414579 1873 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 LINC01109-201ENST00000603837 3081 ntBASIC4.87□□□□□ -1.63
HERVK_113P62684 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HERVK_113P62684 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HERVK_113P62684 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.87□□□□□ -1.63
HERVK_113P62684 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.87□□□□□ -1.63
HERVK_113P62684 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HERVK_113P62684 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HERVK_113P62684 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERVK_113P62684 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERVK_113P62684 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.86□□□□□ -1.63
HERVK_113P62684 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.86□□□□□ -1.63
HERVK_113P62684 OR52B1P-201ENST00000316506 909 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERVK_113P62684 RNA5SP52-201ENST00000362448 134 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.86□□□□□ -1.63
HERVK_113P62684 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.86□□□□□ -1.63
HERVK_113P62684 SNRPEP10-201ENST00000420249 274 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.86□□□□□ -1.63
HERVK_113P62684 AL606489.2-201ENST00000433886 234 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.86□□□□□ -1.63
HERVK_113P62684 MTND6P18-201ENST00000439477 513 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 AC073587.1-201ENST00000447093 876 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.86□□□□□ -1.63
HERVK_113P62684 PPBPP1-201ENST00000510807 373 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 AC093853.1-201ENST00000515689 483 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 AC022616.3-201ENST00000523940 148 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HERVK_113P62684 AC092470.1-201ENST00000546187 132 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.86□□□□□ -1.63
HERVK_113P62684 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.86□□□□□ -1.63
HERVK_113P62684 AC060771.1-201ENST00000582031 164 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.86□□□□□ -1.63
HERVK_113P62684 AC068790.3-201ENST00000602988 553 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 AC025449.1-201ENST00000603896 529 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 AC010680.3-201ENST00000604215 520 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.86□□□□□ -1.63
HERVK_113P62684 AC024614.3-201ENST00000637860 256 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 MTND5P33-201ENST00000571250 1450 ntBASIC4.86□□□□□ -1.63
HERVK_113P62684 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HERVK_113P62684 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERVK_113P62684 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERVK_113P62684 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.86□□□□□ -1.63
HERVK_113P62684 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.86□□□□□ -1.63
HERVK_113P62684 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.85□□□□□ -1.63
HERVK_113P62684 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HERVK_113P62684 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.85□□□□□ -1.63
HERVK_113P62684 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HERVK_113P62684 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HERVK_113P62684 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HERVK_113P62684 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
HERVK_113P62684 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HERVK_113P62684 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms