Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.01□□□□□ -1.61
ERVFC1P60507 RNU6-28P-201ENST00000362378 107 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AL139397.2-201ENST00000404529 772 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AL023807.1-201ENST00000407932 359 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
ERVFC1P60507 RNU6-954P-201ENST00000411355 107 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RNU6-1304P-201ENST00000411374 106 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RPL37P1-201ENST00000432310 284 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 TIMM9P1-201ENST00000436122 256 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AC108734.1-201ENST00000439549 399 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AC114495.1-201ENST00000441274 436 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ERVFC1P60507 AL354710.1-201ENST00000453641 246 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 TRBV26-201ENST00000456572 344 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RPL23AP24-201ENST00000458203 385 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RNU7-182P-201ENST00000459009 62 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RNU7-180P-201ENST00000459240 63 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AL049714.1-201ENST00000466686 347 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.01□□□□□ -1.61
ERVFC1P60507 AC010655.3-201ENST00000478818 450 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AF213884.1-201ENST00000488102 463 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.01□□□□□ -1.61
ERVFC1P60507 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.01□□□□□ -1.61
ERVFC1P60507 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.01□□□□□ -1.61
ERVFC1P60507 MRPS35P2-201ENST00000508242 191 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AC007016.1-201ENST00000512110 244 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AC026801.2-201ENST00000515352 425 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RNU6-764P-201ENST00000516396 105 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RNU6-1271P-201ENST00000517049 105 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.01□□□□□ -1.61
ERVFC1P60507 MYL12AP1-201ENST00000518490 515 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AC107918.3-201ENST00000533272 382 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.01□□□□□ -1.61
ERVFC1P60507 LSM6P2-201ENST00000552208 177 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ERVFC1P60507 AC007224.1-201ENST00000564410 144 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 BNIP3P25-201ENST00000596023 559 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RPL23AP92-201ENST00000603609 255 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.01□□□□□ -1.61
ERVFC1P60507 uc_338.11-201ENST00000619132 160 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ERVFC1P60507 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ERVFC1P60507 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ERVFC1P60507 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ERVFC1P60507 AC107081.3-201ENST00000612715 2034 ntBASIC5.01□□□□□ -1.61
ERVFC1P60507 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
ERVFC1P60507 OR14L1P-202ENST00000641545 3009 ntBASIC5□□□□□ -1.61
ERVFC1P60507 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5□□□□□ -1.61
ERVFC1P60507 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
ERVFC1P60507 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ERVFC1P60507 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5□□□□□ -1.61
ERVFC1P60507 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ERVFC1P60507 RNU6-39P-201ENST00000384344 107 ntBASIC5□□□□□ -1.61
ERVFC1P60507 SNORA57.1-201ENST00000391227 145 ntBASIC5□□□□□ -1.61
ERVFC1P60507 MRPL42P3-201ENST00000401492 326 ntBASIC5□□□□□ -1.61
ERVFC1P60507 AL590609.2-201ENST00000421430 368 ntBASIC5□□□□□ -1.61
ERVFC1P60507 RPL31P12-201ENST00000422587 358 ntBASIC5□□□□□ -1.61
ERVFC1P60507 RPL7AP25-201ENST00000423357 805 ntBASIC5□□□□□ -1.61
ERVFC1P60507 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5□□□□□ -1.61
ERVFC1P60507 MED13P1-201ENST00000428342 171 ntBASIC5□□□□□ -1.61
ERVFC1P60507 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5□□□□□ -1.61
ERVFC1P60507 AC005297.2-201ENST00000450430 606 ntBASIC5□□□□□ -1.61
ERVFC1P60507 MRPS31P2-201ENST00000451581 518 ntBASIC5□□□□□ -1.61
ERVFC1P60507 RN7SL517P-201ENST00000462240 305 ntBASIC5□□□□□ -1.61
ERVFC1P60507 AL049874.2-201ENST00000492636 288 ntBASIC5□□□□□ -1.61
ERVFC1P60507 AC092436.1-201ENST00000506450 503 ntBASIC5□□□□□ -1.61
ERVFC1P60507 Y_RNA.719-201ENST00000517156 106 ntBASIC5□□□□□ -1.61
ERVFC1P60507 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5□□□□□ -1.61
ERVFC1P60507 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5□□□□□ -1.61
ERVFC1P60507 UBE2L4-201ENST00000587688 464 ntBASIC5□□□□□ -1.61
ERVFC1P60507 AL121992.2-201ENST00000606262 256 ntBASIC5□□□□□ -1.61
ERVFC1P60507 AL157817.1-201ENST00000614264 790 ntBASIC5□□□□□ -1.61
ERVFC1P60507 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5□□□□□ -1.61
ERVFC1P60507 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5□□□□□ -1.61
ERVFC1P60507 AC025031.4-201ENST00000621248 3271 ntBASIC5□□□□□ -1.61
ERVFC1P60507 BTBD10P1-201ENST00000549824 1352 ntBASIC5□□□□□ -1.61
ERVFC1P60507 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5□□□□□ -1.61
ERVFC1P60507 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ERVFC1P60507 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5□□□□□ -1.61
ERVFC1P60507 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5□□□□□ -1.61
ERVFC1P60507 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
ERVFC1P60507 ZNF137P-201ENST00000456718 1920 ntBASIC4.99□□□□□ -1.61
ERVFC1P60507 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERVFC1P60507 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ERVFC1P60507 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.99□□□□□ -1.61
ERVFC1P60507 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ERVFC1P60507 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERVFC1P60507 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERVFC1P60507 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERVFC1P60507 Y_RNA.5-201ENST00000362334 102 ntBASIC4.99□□□□□ -1.61
ERVFC1P60507 RNU5E-8P-201ENST00000363502 116 ntBASIC4.99□□□□□ -1.61
ERVFC1P60507 Y_RNA.482-201ENST00000384377 111 ntBASIC4.99□□□□□ -1.61
ERVFC1P60507 SNORD3H-201ENST00000384486 214 ntBASIC4.99□□□□□ -1.61
ERVFC1P60507 RNU6-1222P-201ENST00000384615 107 ntBASIC4.99□□□□□ -1.61
ERVFC1P60507 Y_RNA.557-201ENST00000384680 107 ntBASIC4.99□□□□□ -1.61
ERVFC1P60507 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERVFC1P60507 SSXP10-201ENST00000402595 565 ntBASIC4.99□□□□□ -1.61
ERVFC1P60507 RN7SKP235-201ENST00000410662 305 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms