Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC104986.1-201ENST00000517978 436 ntBASIC2.69□□□□□ -1.98
VSX2P58304 HPRT1P3-201ENST00000539521 576 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.69□□□□□ -1.98
VSX2P58304 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.69□□□□□ -1.98
VSX2P58304 GTF3AP2-201ENST00000557014 266 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.69□□□□□ -1.98
VSX2P58304 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.69□□□□□ -1.98
VSX2P58304 MTND4LP25-201ENST00000570218 163 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AC083760.1-201ENST00000589621 670 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AP001542.2-201ENST00000593141 364 ntBASIC2.69□□□□□ -1.98
VSX2P58304 MTATP6P2-201ENST00000603319 678 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AL445435.1-201ENST00000604232 665 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AL020991.1-201ENST00000612314 373 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AC008759.3-201ENST00000613300 508 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AL355810.1-201ENST00000614629 552 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AC092650.2-201ENST00000619984 902 ntBASIC2.69□□□□□ -1.98
VSX2P58304 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AL512506.2-201ENST00000624472 458 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AP000676.4-201ENST00000624659 623 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AC026634.1-201ENST00000634369 198 ntBASIC2.69□□□□□ -1.98
VSX2P58304 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VSX2P58304 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.69□□□□□ -1.98
VSX2P58304 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
VSX2P58304 AL136520.1-201ENST00000600311 1322 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AP002907.1-201ENST00000606361 1430 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VSX2P58304 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VSX2P58304 AC092593.1-201ENST00000515413 1815 ntBASIC2.68□□□□□ -1.98
VSX2P58304 OR5J1P-201ENST00000313544 939 ntBASIC2.68□□□□□ -1.98
VSX2P58304 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.68□□□□□ -1.98
VSX2P58304 RPL21P75-201ENST00000396599 483 ntBASIC2.68□□□□□ -1.98
VSX2P58304 RPL21P28-201ENST00000401418 483 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AL592114.1-201ENST00000403842 483 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AL024474.1-201ENST00000404655 591 ntBASIC2.68□□□□□ -1.98
VSX2P58304 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC105272.1-201ENST00000438604 198 ntBASIC2.68□□□□□ -1.98
VSX2P58304 RPL39P40-201ENST00000445481 146 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.68□□□□□ -1.98
VSX2P58304 RPL21P39-201ENST00000463605 483 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC011979.1-201ENST00000472300 483 ntBASIC2.68□□□□□ -1.98
VSX2P58304 RPL21P93-201ENST00000480465 489 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC013828.1-201ENST00000481845 158 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC233702.1-201ENST00000482905 502 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC087190.1-201ENST00000484462 480 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC093591.1-201ENST00000491435 481 ntBASIC2.68□□□□□ -1.98
VSX2P58304 RPL21P16-201ENST00000495531 483 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.68□□□□□ -1.98
VSX2P58304 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.68□□□□□ -1.98
VSX2P58304 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.68□□□□□ -1.98
VSX2P58304 COX6CP8-201ENST00000522620 226 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.68□□□□□ -1.98
VSX2P58304 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.68□□□□□ -1.98
VSX2P58304 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VSX2P58304 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.68□□□□□ -1.98
VSX2P58304 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.68□□□□□ -1.98
VSX2P58304 AP001029.3-201ENST00000588063 596 ntBASIC2.68□□□□□ -1.98
VSX2P58304 ELOCP29-201ENST00000588193 334 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC008507.2-201ENST00000588402 1176 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AP001330.4-201ENST00000604350 154 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC091946.2-201ENST00000606105 291 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AP001521.1-201ENST00000609150 300 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AC107871.2-201ENST00000612894 502 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AL353748.2-201ENST00000622148 471 ntBASIC2.68□□□□□ -1.98
VSX2P58304 MFSD8-245ENST00000641743 948 ntBASIC2.68□□□□□ -1.98
VSX2P58304 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
VSX2P58304 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.67□□□□□ -1.98
VSX2P58304 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AL049780.3-201ENST00000624612 1583 ntBASIC2.67□□□□□ -1.98
VSX2P58304 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VSX2P58304 RPL9P7-201ENST00000330965 580 ntBASIC2.67□□□□□ -1.98
VSX2P58304 RNU6-1066P-201ENST00000363573 105 ntBASIC2.67□□□□□ -1.98
VSX2P58304 RNU6-1074P-201ENST00000383995 104 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AL591034.1-201ENST00000407447 340 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.67□□□□□ -1.98
VSX2P58304 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.67□□□□□ -1.98
VSX2P58304 MTCO3P12-201ENST00000416718 547 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.67□□□□□ -1.98
VSX2P58304 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VSX2P58304 SAR1AP4-201ENST00000429225 591 ntBASIC2.67□□□□□ -1.98
VSX2P58304 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.67□□□□□ -1.98
VSX2P58304 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VSX2P58304 AL645638.1-201ENST00000440519 361 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AC112653.1-201ENST00000443851 386 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.67□□□□□ -1.98
VSX2P58304 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.67□□□□□ -1.98
VSX2P58304 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.67□□□□□ -1.98
VSX2P58304 OR6K1P-201ENST00000456766 971 ntBASIC2.67□□□□□ -1.98
VSX2P58304 RN7SKP132-201ENST00000516001 208 ntBASIC2.67□□□□□ -1.98
VSX2P58304 SNORA31.8-201ENST00000516327 108 ntBASIC2.67□□□□□ -1.98
VSX2P58304 RNU6-467P-201ENST00000517027 110 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.67□□□□□ -1.98
VSX2P58304 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.67□□□□□ -1.98
VSX2P58304 MTND1P36-201ENST00000522384 936 ntBASIC2.67□□□□□ -1.98
VSX2P58304 MTCO3P15-201ENST00000526563 574 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.67□□□□□ -1.98
VSX2P58304 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VSX2P58304 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.67□□□□□ -1.98
VSX2P58304 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.67□□□□□ -1.98
VSX2P58304 AC138761.3-201ENST00000579993 334 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms