Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 FP236240.3-201ENST00000623061 327 ntBASIC3.4□□□□□ -1.87
CDH11P55287 CR392039.5-201ENST00000623201 510 ntBASIC3.4□□□□□ -1.87
CDH11P55287 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH11P55287 AC139792.2-201ENST00000624218 587 ntBASIC3.4□□□□□ -1.87
CDH11P55287 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CDH11P55287 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH11P55287 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CDH11P55287 AP004289.2-201ENST00000444413 1457 ntBASIC3.4□□□□□ -1.87
CDH11P55287 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH11P55287 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CDH11P55287 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH11P55287 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH11P55287 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH11P55287 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH11P55287 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH11P55287 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDH11P55287 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CDH11P55287 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH11P55287 RNU6-283P-201ENST00000364788 107 ntBASIC3.39□□□□□ -1.87
CDH11P55287 MIR124-3-201ENST00000384866 87 ntBASIC3.39□□□□□ -1.87
CDH11P55287 MIR200C-201ENST00000384980 68 ntBASIC3.39□□□□□ -1.87
CDH11P55287 MTCYBP36-201ENST00000404146 440 ntBASIC3.39□□□□□ -1.87
CDH11P55287 RNU4-78P-201ENST00000410940 126 ntBASIC3.39□□□□□ -1.87
CDH11P55287 RN7SKP142-201ENST00000411236 328 ntBASIC3.39□□□□□ -1.87
CDH11P55287 RPS7P13-201ENST00000413955 498 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC009237.5-201ENST00000414271 501 ntBASIC3.39□□□□□ -1.87
CDH11P55287 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC006366.1-201ENST00000422002 759 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH11P55287 SNORA71B-202ENST00000439232 272 ntBASIC3.39□□□□□ -1.87
CDH11P55287 RPL7P36-201ENST00000444633 681 ntBASIC3.39□□□□□ -1.87
CDH11P55287 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH11P55287 RPL7P52-201ENST00000449200 742 ntBASIC3.39□□□□□ -1.87
CDH11P55287 RPL7P15-201ENST00000461190 712 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC082651.2-201ENST00000496833 166 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC091435.1-201ENST00000505442 584 ntBASIC3.39□□□□□ -1.87
CDH11P55287 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH11P55287 CBX3P3-201ENST00000508108 532 ntBASIC3.39□□□□□ -1.87
CDH11P55287 FABP5P5-201ENST00000515537 406 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH11P55287 AC025881.1-201ENST00000518851 512 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH11P55287 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH11P55287 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH11P55287 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH11P55287 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH11P55287 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH11P55287 AC090615.1-201ENST00000577519 154 ntBASIC3.39□□□□□ -1.87
CDH11P55287 MIR5697-201ENST00000578045 78 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC103987.3-201ENST00000582071 292 ntBASIC3.39□□□□□ -1.87
CDH11P55287 MIR548AB-201ENST00000584917 84 ntBASIC3.39□□□□□ -1.87
CDH11P55287 PRELID3BP8-201ENST00000604148 295 ntBASIC3.39□□□□□ -1.87
CDH11P55287 IGHV3-29-201ENST00000604817 344 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC087752.4-201ENST00000605911 462 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC025048.6-202ENST00000627667 438 ntBASIC3.39□□□□□ -1.87
CDH11P55287 AC093591.3-201ENST00000634516 308 ntBASIC3.39□□□□□ -1.87
CDH11P55287 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH11P55287 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH11P55287 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH11P55287 FGF7P2-201ENST00000332473 296 ntBASIC3.38□□□□□ -1.87
CDH11P55287 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH11P55287 SNORD116-4-201ENST00000384733 96 ntBASIC3.38□□□□□ -1.87
CDH11P55287 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH11P55287 RPL17P12-201ENST00000413391 526 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AC244098.2-201ENST00000422068 99 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH11P55287 Z74696.2-201ENST00000436514 498 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AL031667.1-201ENST00000440222 725 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CDH11P55287 FAM103A2P-201ENST00000444122 354 ntBASIC3.38□□□□□ -1.87
CDH11P55287 USP9YP29-201ENST00000445112 563 ntBASIC3.38□□□□□ -1.87
CDH11P55287 HMGN2P21-201ENST00000447764 270 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AC006480.1-201ENST00000449887 378 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AC104308.1-201ENST00000454621 333 ntBASIC3.38□□□□□ -1.87
CDH11P55287 SNORD121B-201ENST00000458838 81 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AC012170.1-201ENST00000495139 359 ntBASIC3.38□□□□□ -1.87
CDH11P55287 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH11P55287 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH11P55287 MTCO2P32-201ENST00000514865 403 ntBASIC3.38□□□□□ -1.87
CDH11P55287 RNU6-1003P-201ENST00000517099 105 ntBASIC3.38□□□□□ -1.87
CDH11P55287 RNU6-1231P-201ENST00000517185 103 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AP002963.1-201ENST00000530590 184 ntBASIC3.38□□□□□ -1.87
CDH11P55287 OR4P1P-201ENST00000530808 1136 ntBASIC3.38□□□□□ -1.87
CDH11P55287 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH11P55287 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH11P55287 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH11P55287 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH11P55287 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH11P55287 AC087499.8-201ENST00000578406 226 ntBASIC3.38□□□□□ -1.87
CDH11P55287 MIR4738-201ENST00000579134 87 ntBASIC3.38□□□□□ -1.87
CDH11P55287 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CDH11P55287 UBE2L4-201ENST00000587688 464 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AC068276.1-201ENST00000605793 379 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AC012531.5-201ENST00000611375 151 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH11P55287 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH11P55287 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AC039056.2-201ENST00000622261 511 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AL158801.5-201ENST00000623123 465 ntBASIC3.38□□□□□ -1.87
CDH11P55287 AL603839.4-201ENST00000624658 1005 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms