Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
VCPP55072 SUGT1P1-201ENST00000379514 476 ntBASIC3.38□□□□□ -1.87
VCPP55072 SNORA40.2-201ENST00000390847 128 ntBASIC3.38□□□□□ -1.87
VCPP55072 MRPL50P2-201ENST00000416821 482 ntBASIC3.38□□□□□ -1.87
VCPP55072 HSPE1P1-201ENST00000421494 318 ntBASIC3.38□□□□□ -1.87
VCPP55072 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.38□□□□□ -1.87
VCPP55072 MTCO3P1-205ENST00000422088 832 ntBASIC3.38□□□□□ -1.87
VCPP55072 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.38□□□□□ -1.87
VCPP55072 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
VCPP55072 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.38□□□□□ -1.87
VCPP55072 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.38□□□□□ -1.87
VCPP55072 MTCO3P2-201ENST00000457365 171 ntBASIC3.38□□□□□ -1.87
VCPP55072 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
VCPP55072 HMGB1P25-201ENST00000468402 607 ntBASIC3.38□□□□□ -1.87
VCPP55072 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VCPP55072 RPL7P5-201ENST00000471472 736 ntBASIC3.38□□□□□ -1.87
VCPP55072 AC092185.1-201ENST00000491371 97 ntBASIC3.38□□□□□ -1.87
VCPP55072 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VCPP55072 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.38□□□□□ -1.87
VCPP55072 AC113347.3-201ENST00000509113 148 ntBASIC3.38□□□□□ -1.87
VCPP55072 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VCPP55072 MTCYBP37-201ENST00000510642 1133 ntBASIC3.38□□□□□ -1.87
VCPP55072 AC008885.1-201ENST00000514930 301 ntBASIC3.38□□□□□ -1.87
VCPP55072 RNA5SP217-201ENST00000515959 91 ntBASIC3.38□□□□□ -1.87
VCPP55072 RNA5SP380-201ENST00000517190 98 ntBASIC3.38□□□□□ -1.87
VCPP55072 TRAV37-201ENST00000553906 342 ntBASIC3.38□□□□□ -1.87
VCPP55072 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
VCPP55072 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.38□□□□□ -1.87
VCPP55072 MIR4435-1-201ENST00000582552 80 ntBASIC3.38□□□□□ -1.87
VCPP55072 VN1R83P-201ENST00000595685 445 ntBASIC3.38□□□□□ -1.87
VCPP55072 AC073968.1-201ENST00000618594 637 ntBASIC3.38□□□□□ -1.87
VCPP55072 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.38□□□□□ -1.87
VCPP55072 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VCPP55072 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.38□□□□□ -1.87
VCPP55072 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VCPP55072 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VCPP55072 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.37□□□□□ -1.87
VCPP55072 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VCPP55072 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.37□□□□□ -1.87
VCPP55072 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VCPP55072 AC007435.1-201ENST00000421086 415 ntBASIC3.37□□□□□ -1.87
VCPP55072 AL035410.1-201ENST00000427409 427 ntBASIC3.37□□□□□ -1.87
VCPP55072 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.37□□□□□ -1.87
VCPP55072 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.37□□□□□ -1.87
VCPP55072 USP9YP22-201ENST00000438971 294 ntBASIC3.37□□□□□ -1.87
VCPP55072 AL645638.1-201ENST00000440519 361 ntBASIC3.37□□□□□ -1.87
VCPP55072 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.37□□□□□ -1.87
VCPP55072 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.37□□□□□ -1.87
VCPP55072 DUXAP8-207ENST00000456786 622 ntBASIC3.37□□□□□ -1.87
VCPP55072 PNPLA4P1-201ENST00000458328 305 ntBASIC3.37□□□□□ -1.87
VCPP55072 GTF2IP9-201ENST00000502460 301 ntBASIC3.37□□□□□ -1.87
VCPP55072 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.37□□□□□ -1.87
VCPP55072 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.37□□□□□ -1.87
VCPP55072 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
VCPP55072 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.37□□□□□ -1.87
VCPP55072 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
VCPP55072 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.37□□□□□ -1.87
VCPP55072 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.37□□□□□ -1.87
VCPP55072 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.37□□□□□ -1.87
VCPP55072 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.37□□□□□ -1.87
VCPP55072 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.37□□□□□ -1.87
VCPP55072 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.37□□□□□ -1.87
VCPP55072 AC069545.1-201ENST00000605671 358 ntBASIC3.37□□□□□ -1.87
VCPP55072 AC004832.5-201ENST00000608677 401 ntBASIC3.37□□□□□ -1.87
VCPP55072 AC092954.1-201ENST00000609121 445 ntBASIC3.37□□□□□ -1.87
VCPP55072 VIS1.1-201ENST00000610517 203 ntBASIC3.37□□□□□ -1.87
VCPP55072 DUXAP10-204ENST00000612052 616 ntBASIC3.37□□□□□ -1.87
VCPP55072 AC087241.4-201ENST00000612441 480 ntBASIC3.37□□□□□ -1.87
VCPP55072 AC095031.1-201ENST00000623685 672 ntBASIC3.37□□□□□ -1.87
VCPP55072 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.37□□□□□ -1.87
VCPP55072 LINC02211-204ENST00000642024 1070 ntBASIC3.37□□□□□ -1.87
VCPP55072 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.37□□□□□ -1.87
VCPP55072 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VCPP55072 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.36□□□□□ -1.87
VCPP55072 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.36□□□□□ -1.87
VCPP55072 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VCPP55072 RNU6-821P-201ENST00000390995 107 ntBASIC3.36□□□□□ -1.87
VCPP55072 AL023807.1-201ENST00000407932 359 ntBASIC3.36□□□□□ -1.87
VCPP55072 RNU6-584P-201ENST00000410350 95 ntBASIC3.36□□□□□ -1.87
VCPP55072 AL133384.1-201ENST00000412744 351 ntBASIC3.36□□□□□ -1.87
VCPP55072 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.36□□□□□ -1.87
VCPP55072 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.36□□□□□ -1.87
VCPP55072 MTND2P9-201ENST00000422293 931 ntBASIC3.36□□□□□ -1.87
VCPP55072 AC012498.1-201ENST00000424037 437 ntBASIC3.36□□□□□ -1.87
VCPP55072 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.36□□□□□ -1.87
VCPP55072 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.36□□□□□ -1.87
VCPP55072 AC009969.1-201ENST00000438726 172 ntBASIC3.36□□□□□ -1.87
VCPP55072 RPL23AP16-201ENST00000441715 421 ntBASIC3.36□□□□□ -1.87
VCPP55072 AC004022.1-201ENST00000447766 1066 ntBASIC3.36□□□□□ -1.87
VCPP55072 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.36□□□□□ -1.87
VCPP55072 TRBV26-201ENST00000456572 344 ntBASIC3.36□□□□□ -1.87
VCPP55072 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.36□□□□□ -1.87
VCPP55072 AC105914.1-201ENST00000511798 226 ntBASIC3.36□□□□□ -1.87
VCPP55072 SNORD59.2-201ENST00000516873 68 ntBASIC3.36□□□□□ -1.87
VCPP55072 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.36□□□□□ -1.87
VCPP55072 AC087808.1-201ENST00000520501 361 ntBASIC3.36□□□□□ -1.87
VCPP55072 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.36□□□□□ -1.87
VCPP55072 PSMA2P1-201ENST00000526365 646 ntBASIC3.36□□□□□ -1.87
VCPP55072 AP001189.2-201ENST00000527320 189 ntBASIC3.36□□□□□ -1.87
VCPP55072 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms