Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC006927.4-201ENST00000639187 543 ntBASIC3.26□□□□□ -1.89
SMSP52788 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMSP52788 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
SMSP52788 DEFB108F-201ENST00000344638 222 ntBASIC3.25□□□□□ -1.89
SMSP52788 SNORD9-201ENST00000362566 104 ntBASIC3.25□□□□□ -1.89
SMSP52788 Y_RNA.234-201ENST00000364409 97 ntBASIC3.25□□□□□ -1.89
SMSP52788 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMSP52788 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.25□□□□□ -1.89
SMSP52788 RPL7P60-201ENST00000397636 735 ntBASIC3.25□□□□□ -1.89
SMSP52788 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.25□□□□□ -1.89
SMSP52788 SSXP9-201ENST00000417503 292 ntBASIC3.25□□□□□ -1.89
SMSP52788 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.25□□□□□ -1.89
SMSP52788 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.25□□□□□ -1.89
SMSP52788 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.25□□□□□ -1.89
SMSP52788 MTATP6P4-201ENST00000427725 675 ntBASIC3.25□□□□□ -1.89
SMSP52788 ZYG11AP1-201ENST00000430329 837 ntBASIC3.25□□□□□ -1.89
SMSP52788 RPS25P9-201ENST00000435591 252 ntBASIC3.25□□□□□ -1.89
SMSP52788 AL357552.1-201ENST00000445254 415 ntBASIC3.25□□□□□ -1.89
SMSP52788 BX322784.1-201ENST00000455793 1077 ntBASIC3.25□□□□□ -1.89
SMSP52788 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.25□□□□□ -1.89
SMSP52788 snoU13.8-201ENST00000458890 104 ntBASIC3.25□□□□□ -1.89
SMSP52788 AC010468.1-201ENST00000461022 817 ntBASIC3.25□□□□□ -1.89
SMSP52788 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.25□□□□□ -1.89
SMSP52788 AC104563.1-201ENST00000476147 376 ntBASIC3.25□□□□□ -1.89
SMSP52788 FAM172BP-201ENST00000487497 1089 ntBASIC3.25□□□□□ -1.89
SMSP52788 AC108729.1-201ENST00000487812 947 ntBASIC3.25□□□□□ -1.89
SMSP52788 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.25□□□□□ -1.89
SMSP52788 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.25□□□□□ -1.89
SMSP52788 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.25□□□□□ -1.89
SMSP52788 DEFB108D-201ENST00000527787 222 ntBASIC3.25□□□□□ -1.89
SMSP52788 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.25□□□□□ -1.89
SMSP52788 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.25□□□□□ -1.89
SMSP52788 OR6C7P-201ENST00000547875 934 ntBASIC3.25□□□□□ -1.89
SMSP52788 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.25□□□□□ -1.89
SMSP52788 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.25□□□□□ -1.89
SMSP52788 OR4K8P-201ENST00000578842 1048 ntBASIC3.25□□□□□ -1.89
SMSP52788 COX6CP3-201ENST00000580869 223 ntBASIC3.25□□□□□ -1.89
SMSP52788 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.25□□□□□ -1.89
SMSP52788 AC112220.3-201ENST00000605502 502 ntBASIC3.25□□□□□ -1.89
SMSP52788 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.25□□□□□ -1.89
SMSP52788 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.25□□□□□ -1.89
SMSP52788 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.25□□□□□ -1.89
SMSP52788 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMSP52788 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMSP52788 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.25□□□□□ -1.89
SMSP52788 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMSP52788 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMSP52788 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SMSP52788 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.24□□□□□ -1.89
SMSP52788 RNU1-75P-201ENST00000347264 129 ntBASIC3.24□□□□□ -1.89
SMSP52788 AL161781.1-201ENST00000354277 403 ntBASIC3.24□□□□□ -1.89
SMSP52788 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMSP52788 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
SMSP52788 EI24P2-201ENST00000397776 1076 ntBASIC3.24□□□□□ -1.89
SMSP52788 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.24□□□□□ -1.89
SMSP52788 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.24□□□□□ -1.89
SMSP52788 RNA5SP120-201ENST00000410900 112 ntBASIC3.24□□□□□ -1.89
SMSP52788 USP9YP33-201ENST00000412220 421 ntBASIC3.24□□□□□ -1.89
SMSP52788 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.24□□□□□ -1.89
SMSP52788 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.24□□□□□ -1.89
SMSP52788 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.24□□□□□ -1.89
SMSP52788 RPS15AP6-201ENST00000420703 385 ntBASIC3.24□□□□□ -1.89
SMSP52788 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.24□□□□□ -1.89
SMSP52788 USP9YP35-201ENST00000435696 412 ntBASIC3.24□□□□□ -1.89
SMSP52788 SNRPEP7-201ENST00000438350 220 ntBASIC3.24□□□□□ -1.89
SMSP52788 AC002381.1-201ENST00000447049 280 ntBASIC3.24□□□□□ -1.89
SMSP52788 MTND1P9-201ENST00000453775 944 ntBASIC3.24□□□□□ -1.89
SMSP52788 SNORA59A-201ENST00000459326 152 ntBASIC3.24□□□□□ -1.89
SMSP52788 RPL21P8-201ENST00000465083 535 ntBASIC3.24□□□□□ -1.89
SMSP52788 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.24□□□□□ -1.89
SMSP52788 AC023598.1-201ENST00000472521 361 ntBASIC3.24□□□□□ -1.89
SMSP52788 AP000563.1-201ENST00000490865 758 ntBASIC3.24□□□□□ -1.89
SMSP52788 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.24□□□□□ -1.89
SMSP52788 VN1R104P-201ENST00000505115 1009 ntBASIC3.24□□□□□ -1.89
SMSP52788 CBX3P3-201ENST00000508108 532 ntBASIC3.24□□□□□ -1.89
SMSP52788 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.24□□□□□ -1.89
SMSP52788 FABP5P12-201ENST00000515543 389 ntBASIC3.24□□□□□ -1.89
SMSP52788 RNA5SP216-201ENST00000516111 123 ntBASIC3.24□□□□□ -1.89
SMSP52788 RNU6-311P-201ENST00000516224 102 ntBASIC3.24□□□□□ -1.89
SMSP52788 RNU6-150P-201ENST00000516237 95 ntBASIC3.24□□□□□ -1.89
SMSP52788 SNORA70.16-201ENST00000516390 95 ntBASIC3.24□□□□□ -1.89
SMSP52788 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
SMSP52788 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
SMSP52788 SNORD59.2-201ENST00000516873 68 ntBASIC3.24□□□□□ -1.89
SMSP52788 RNU6-528P-201ENST00000516926 100 ntBASIC3.24□□□□□ -1.89
SMSP52788 RNU6-714P-201ENST00000516963 103 ntBASIC3.24□□□□□ -1.89
SMSP52788 RNU6-711P-201ENST00000517255 106 ntBASIC3.24□□□□□ -1.89
SMSP52788 FAM60DP-201ENST00000524174 632 ntBASIC3.24□□□□□ -1.89
SMSP52788 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.24□□□□□ -1.89
SMSP52788 AC006518.1-201ENST00000541449 943 ntBASIC3.24□□□□□ -1.89
SMSP52788 AC026333.2-201ENST00000542164 106 ntBASIC3.24□□□□□ -1.89
SMSP52788 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.24□□□□□ -1.89
SMSP52788 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.24□□□□□ -1.89
SMSP52788 MIR3921-201ENST00000577308 85 ntBASIC3.24□□□□□ -1.89
SMSP52788 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.24□□□□□ -1.89
SMSP52788 AC011451.2-201ENST00000604303 598 ntBASIC3.24□□□□□ -1.89
SMSP52788 AC106900.2-201ENST00000604994 317 ntBASIC3.24□□□□□ -1.89
SMSP52788 AC009570.1-201ENST00000609599 745 ntBASIC3.24□□□□□ -1.89
SMSP52788 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SMSP52788 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms