Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
BRCC3P46736 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BRCC3P46736 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCC3P46736 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BRCC3P46736 AC000403.1-201ENST00000613696 3585 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 GDI2P1-201ENST00000429312 1336 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCC3P46736 RPL7P26-201ENST00000333817 754 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 SNORD113-6-201ENST00000363345 75 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 Y_RNA.493-201ENST00000384422 102 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 SNORA48.8-201ENST00000391324 134 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 RSL24D1P4-201ENST00000400938 484 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 RPL7P25-201ENST00000404151 721 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 RNA5SP31-201ENST00000411144 127 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.25□□□□□ -1.89
BRCC3P46736 USP9YP11-201ENST00000427537 717 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AC022018.1-201ENST00000430685 241 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.25□□□□□ -1.89
BRCC3P46736 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.25□□□□□ -1.89
BRCC3P46736 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.25□□□□□ -1.89
BRCC3P46736 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.25□□□□□ -1.89
BRCC3P46736 RPS24P6-201ENST00000452670 400 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AC013828.1-201ENST00000481845 158 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AC068724.1-201ENST00000487100 792 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.25□□□□□ -1.89
BRCC3P46736 OR2A20P-203ENST00000498397 1268 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCC3P46736 RN7SKP289-201ENST00000517244 295 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AC026407.1-201ENST00000518369 204 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 RPL12P22-201ENST00000519073 490 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.25□□□□□ -1.89
BRCC3P46736 AP001189.2-201ENST00000527320 189 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 NBEAP1-201ENST00000554452 979 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.25□□□□□ -1.89
BRCC3P46736 AC008507.1-201ENST00000587506 734 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AC245036.5-201ENST00000596330 847 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AC005332.6-201ENST00000613178 446 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 AP000484.1-201ENST00000620067 1252 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.25□□□□□ -1.89
BRCC3P46736 SCARNA15.3-201ENST00000626315 122 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 SCARNA4.1-201ENST00000628597 123 ntBASIC3.25□□□□□ -1.89
BRCC3P46736 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.25□□□□□ -1.89
BRCC3P46736 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.25□□□□□ -1.89
BRCC3P46736 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
BRCC3P46736 NUP58P1-201ENST00000502546 1738 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AC093908.1-201ENST00000623125 8092 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AP000776.1-201ENST00000530032 1663 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRCC3P46736 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BRCC3P46736 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BRCC3P46736 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.24□□□□□ -1.89
BRCC3P46736 AC073325.2-201ENST00000339545 159 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 RNU1-75P-201ENST00000347264 129 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
BRCC3P46736 RNU6-989P-201ENST00000362756 107 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 RNU6-1214P-201ENST00000363650 109 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 RNVU1-3-201ENST00000364313 161 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 SNORA51.2-201ENST00000364595 132 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 RNU6-821P-201ENST00000390995 107 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 ARF4P3-201ENST00000397387 509 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AL138880.1-201ENST00000405824 642 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 EEF1A1P41-201ENST00000414667 207 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 VPS26BP1-201ENST00000417155 755 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.24□□□□□ -1.89
BRCC3P46736 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.24□□□□□ -1.89
BRCC3P46736 MTND1P26-201ENST00000440488 538 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.24□□□□□ -1.89
BRCC3P46736 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.24□□□□□ -1.89
BRCC3P46736 RPS27P29-201ENST00000463110 252 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AC117440.1-201ENST00000474107 571 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AC097462.2-201ENST00000504623 481 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 HSPE1P23-201ENST00000509838 286 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 TXNP6-201ENST00000510190 310 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.24□□□□□ -1.89
BRCC3P46736 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.24□□□□□ -1.89
BRCC3P46736 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.24□□□□□ -1.89
BRCC3P46736 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.24□□□□□ -1.89
BRCC3P46736 AP004371.1-201ENST00000525240 214 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.24□□□□□ -1.89
BRCC3P46736 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.24□□□□□ -1.89
BRCC3P46736 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRCC3P46736 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.24□□□□□ -1.89
BRCC3P46736 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.24□□□□□ -1.89
BRCC3P46736 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.24□□□□□ -1.89
BRCC3P46736 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.24□□□□□ -1.89
BRCC3P46736 AL591516.1-201ENST00000611326 274 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AC120349.2-201ENST00000625002 298 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
BRCC3P46736 MTND2P41-201ENST00000637599 773 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 MTND5P24-201ENST00000438892 1767 ntBASIC3.24□□□□□ -1.89
BRCC3P46736 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.24□□□□□ -1.89
BRCC3P46736 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRCC3P46736 AC107982.1-201ENST00000507171 1300 ntBASIC3.23□□□□□ -1.89
BRCC3P46736 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
BRCC3P46736 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
BRCC3P46736 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms