Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.1□□□□□ -1.91
SSR1P43307 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.1□□□□□ -1.91
SSR1P43307 AC008885.1-201ENST00000514930 301 ntBASIC3.1□□□□□ -1.91
SSR1P43307 OR4R2P-201ENST00000530815 597 ntBASIC3.1□□□□□ -1.91
SSR1P43307 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSR1P43307 AC103810.1-201ENST00000579873 453 ntBASIC3.1□□□□□ -1.91
SSR1P43307 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.1□□□□□ -1.91
SSR1P43307 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.1□□□□□ -1.91
SSR1P43307 AP001542.2-201ENST00000593141 364 ntBASIC3.1□□□□□ -1.91
SSR1P43307 AL161756.2-201ENST00000604597 246 ntBASIC3.1□□□□□ -1.91
SSR1P43307 AL583856.2-201ENST00000606298 543 ntBASIC3.1□□□□□ -1.91
SSR1P43307 AC034102.8-201ENST00000615146 484 ntBASIC3.1□□□□□ -1.91
SSR1P43307 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.1□□□□□ -1.91
SSR1P43307 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSR1P43307 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.1□□□□□ -1.91
SSR1P43307 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSR1P43307 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SSR1P43307 RPL9P7-201ENST00000330965 580 ntBASIC3.09□□□□□ -1.91
SSR1P43307 SNORA63.1-201ENST00000362493 131 ntBASIC3.09□□□□□ -1.91
SSR1P43307 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SSR1P43307 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SSR1P43307 AL024474.1-201ENST00000404655 591 ntBASIC3.09□□□□□ -1.91
SSR1P43307 RNU2-28P-201ENST00000410457 189 ntBASIC3.09□□□□□ -1.91
SSR1P43307 AC080125.1-201ENST00000414888 684 ntBASIC3.09□□□□□ -1.91
SSR1P43307 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.09□□□□□ -1.91
SSR1P43307 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.09□□□□□ -1.91
SSR1P43307 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.09□□□□□ -1.91
SSR1P43307 MRPL42P4-201ENST00000453267 443 ntBASIC3.09□□□□□ -1.91
SSR1P43307 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.09□□□□□ -1.91
SSR1P43307 AC117440.1-201ENST00000474107 571 ntBASIC3.09□□□□□ -1.91
SSR1P43307 RPS17P11-201ENST00000474297 293 ntBASIC3.09□□□□□ -1.91
SSR1P43307 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.09□□□□□ -1.91
SSR1P43307 AC013828.1-201ENST00000481845 158 ntBASIC3.09□□□□□ -1.91
SSR1P43307 RPL23AP70-201ENST00000483361 460 ntBASIC3.09□□□□□ -1.91
SSR1P43307 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.09□□□□□ -1.91
SSR1P43307 AC093801.2-201ENST00000503966 1050 ntBASIC3.09□□□□□ -1.91
SSR1P43307 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.09□□□□□ -1.91
SSR1P43307 RNA5SP471-201ENST00000516971 106 ntBASIC3.09□□□□□ -1.91
SSR1P43307 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.09□□□□□ -1.91
SSR1P43307 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.09□□□□□ -1.91
SSR1P43307 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.09□□□□□ -1.91
SSR1P43307 ELOCP31-201ENST00000540463 467 ntBASIC3.09□□□□□ -1.91
SSR1P43307 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.09□□□□□ -1.91
SSR1P43307 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.09□□□□□ -1.91
SSR1P43307 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.09□□□□□ -1.91
SSR1P43307 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.09□□□□□ -1.91
SSR1P43307 AC053481.3-201ENST00000577881 843 ntBASIC3.09□□□□□ -1.91
SSR1P43307 FAM60BP-201ENST00000578364 658 ntBASIC3.09□□□□□ -1.91
SSR1P43307 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.09□□□□□ -1.91
SSR1P43307 AC015871.2-201ENST00000603605 948 ntBASIC3.09□□□□□ -1.91
SSR1P43307 AL445435.1-201ENST00000604232 665 ntBASIC3.09□□□□□ -1.91
SSR1P43307 AP003973.1-201ENST00000604639 691 ntBASIC3.09□□□□□ -1.91
SSR1P43307 AL020991.1-201ENST00000612314 373 ntBASIC3.09□□□□□ -1.91
SSR1P43307 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SSR1P43307 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.09□□□□□ -1.91
SSR1P43307 AC080188.3-201ENST00000624842 748 ntBASIC3.09□□□□□ -1.91
SSR1P43307 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
SSR1P43307 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.09□□□□□ -1.91
SSR1P43307 AP000526.1-201ENST00000603308 1388 ntBASIC3.09□□□□□ -1.92
SSR1P43307 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
SSR1P43307 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.92
SSR1P43307 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.08□□□□□ -1.92
SSR1P43307 AL049780.3-201ENST00000624612 1583 ntBASIC3.08□□□□□ -1.92
SSR1P43307 PABPC1P9-201ENST00000426076 1612 ntBASIC3.08□□□□□ -1.92
SSR1P43307 AL359693.1-201ENST00000614959 2407 ntBASIC3.08□□□□□ -1.92
SSR1P43307 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSR1P43307 SET-203ENST00000372688 801 ntTSL 2 BASIC3.08□□□□□ -1.92
SSR1P43307 TAS2R15P-201ENST00000390674 928 ntBASIC3.08□□□□□ -1.92
SSR1P43307 RNA5SP171-201ENST00000391071 115 ntBASIC3.08□□□□□ -1.92
SSR1P43307 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.08□□□□□ -1.92
SSR1P43307 C1DP1-201ENST00000426049 402 ntBASIC3.08□□□□□ -1.92
SSR1P43307 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.08□□□□□ -1.92
SSR1P43307 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.08□□□□□ -1.92
SSR1P43307 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.08□□□□□ -1.92
SSR1P43307 AL109741.2-201ENST00000455561 343 ntBASIC3.08□□□□□ -1.92
SSR1P43307 RPL27AP5-201ENST00000469428 449 ntBASIC3.08□□□□□ -1.92
SSR1P43307 AC092902.1-201ENST00000486999 259 ntBASIC3.08□□□□□ -1.92
SSR1P43307 RPS15AP34-201ENST00000487776 387 ntBASIC3.08□□□□□ -1.92
SSR1P43307 AC006390.1-201ENST00000508068 283 ntBASIC3.08□□□□□ -1.92
SSR1P43307 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.08□□□□□ -1.92
SSR1P43307 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.08□□□□□ -1.92
SSR1P43307 SNORA26.10-201ENST00000516427 141 ntBASIC3.08□□□□□ -1.92
SSR1P43307 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SSR1P43307 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.08□□□□□ -1.92
SSR1P43307 SULT1C2P1-202ENST00000562418 459 ntBASIC3.08□□□□□ -1.92
SSR1P43307 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSR1P43307 MIR5004-201ENST00000579078 107 ntBASIC3.08□□□□□ -1.92
SSR1P43307 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.08□□□□□ -1.92
SSR1P43307 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.08□□□□□ -1.92
SSR1P43307 BNIP3P11-201ENST00000603878 563 ntBASIC3.08□□□□□ -1.92
SSR1P43307 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.08□□□□□ -1.92
SSR1P43307 MIR92B-201ENST00000607575 96 ntBASIC3.08□□□□□ -1.92
SSR1P43307 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.08□□□□□ -1.92
SSR1P43307 AC068880.4-201ENST00000623082 495 ntBASIC3.08□□□□□ -1.92
SSR1P43307 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.07□□□□□ -1.92
SSR1P43307 RNU5B-4P-201ENST00000363508 111 ntBASIC3.07□□□□□ -1.92
SSR1P43307 SNORA54-201ENST00000384281 123 ntBASIC3.07□□□□□ -1.92
SSR1P43307 RNU6-549P-201ENST00000384433 107 ntBASIC3.07□□□□□ -1.92
SSR1P43307 AL133384.1-201ENST00000412744 351 ntBASIC3.07□□□□□ -1.92
SSR1P43307 RPL7P30-201ENST00000420888 709 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms