Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 TXNP1-201ENST00000441872 371 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 NOTCH2P1-201ENST00000443481 624 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 MTCYBP3-201ENST00000445588 1137 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 RN7SL542P-201ENST00000467147 294 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 LINC00888-204ENST00000487386 421 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 RPF2P2-201ENST00000504693 896 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.5□□□□□ -1.85
HNF4AP41235 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HNF4AP41235 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.5□□□□□ -1.85
HNF4AP41235 AL359273.1-201ENST00000510918 627 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC109445.1-201ENST00000512356 383 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC022483.1-201ENST00000514020 567 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 RNU6-583P-201ENST00000516012 92 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC105185.1-201ENST00000518705 535 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC103783.1-201ENST00000520506 373 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 MTCO1P49-201ENST00000523429 802 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.5□□□□□ -1.85
HNF4AP41235 AC135279.1-201ENST00000543493 504 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.5□□□□□ -1.85
HNF4AP41235 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.5□□□□□ -1.85
HNF4AP41235 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.5□□□□□ -1.85
HNF4AP41235 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.5□□□□□ -1.85
HNF4AP41235 MIR3921-201ENST00000577308 85 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC090615.1-201ENST00000577519 154 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC011260.1-201ENST00000578420 472 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 OR4K8P-201ENST00000578842 1048 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 MIR4425-201ENST00000580572 84 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.5□□□□□ -1.85
HNF4AP41235 VN1R82P-201ENST00000601481 356 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.5□□□□□ -1.85
HNF4AP41235 AL133393.1-201ENST00000603277 287 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.5□□□□□ -1.85
HNF4AP41235 AL138880.2-201ENST00000616214 239 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC009090.3-201ENST00000616553 565 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC079248.2-201ENST00000623779 326 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HNF4AP41235 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
HNF4AP41235 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
HNF4AP41235 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.5□□□□□ -1.85
HNF4AP41235 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.5□□□□□ -1.85
HNF4AP41235 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.5□□□□□ -1.85
HNF4AP41235 PWAR6-201ENST00000552334 4618 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HNF4AP41235 MAPK10-322ENST00000641485 4530 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
HNF4AP41235 RNA5SP124-201ENST00000362739 110 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 RNU5A-2P-201ENST00000384337 116 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 MIR134-201ENST00000385258 73 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 U3.39-201ENST00000408569 239 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 RNU6ATAC-201ENST00000408749 126 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AC016907.1-201ENST00000419483 435 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 AL050321.1-201ENST00000432363 400 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.49□□□□□ -1.85
HNF4AP41235 GOT2P5-201ENST00000433995 546 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 NDUFB4P6-201ENST00000436819 366 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.49□□□□□ -1.85
HNF4AP41235 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.49□□□□□ -1.85
HNF4AP41235 AL592447.1-201ENST00000447592 540 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 RPS27AP8-201ENST00000452665 445 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AL672167.3-201ENST00000465951 960 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.49□□□□□ -1.85
HNF4AP41235 MTND3P7-201ENST00000474435 343 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 RPS3AP50-201ENST00000487064 803 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 SETP14-201ENST00000497538 873 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AC147055.4-201ENST00000504399 745 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 AC111000.2-201ENST00000507775 550 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.49□□□□□ -1.85
HNF4AP41235 RN7SKP60-201ENST00000516985 239 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 RNU6-232P-201ENST00000517144 64 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 RANP9-201ENST00000519957 271 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.49□□□□□ -1.85
HNF4AP41235 OR5AP1P-201ENST00000529730 940 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.49□□□□□ -1.85
HNF4AP41235 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.49□□□□□ -1.85
HNF4AP41235 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.49□□□□□ -1.85
HNF4AP41235 MTCO3P24-201ENST00000572729 782 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 OR4K7P-201ENST00000580232 945 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AC090616.2-202ENST00000584248 222 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AC006130.2-201ENST00000586202 326 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AC006077.1-201ENST00000604746 343 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AC072039.2-201ENST00000608883 439 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AC069209.1-201ENST00000619282 651 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.49□□□□□ -1.85
HNF4AP41235 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.49□□□□□ -1.85
HNF4AP41235 AC068137.4-201ENST00000638485 296 ntBASIC3.49□□□□□ -1.85
HNF4AP41235 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HNF4AP41235 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.49□□□□□ -1.85
HNF4AP41235 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms